RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 TSPY1Q01534 308 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 OLFML2BQ68BL8 750 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 NYXQ9GZU5 481 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 RAD21L1Q9H4I0 556 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 FBXO2Q9UK22 296 aaPredicted RBP20.72■□□□□ 0.91
BPTF-201ENST00000306378 COL4A3BPQ9Y5P4 624 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 HLA-DPA1P20036 260 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 hCG_2014768A0A024R1R8 64 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 ENO4A6NNW6 628 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 MEIS1O00470 390 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 PFKFB2O60825 505 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 PPP2R5CQ13362 524 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 SMG5Q9UPR3 1016 aaKnown RBP20.72■□□□□ 0.91
BPTF-201ENST00000306378 OTUD6AQ7L8S5 288 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 FANCEQ9HB96 536 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 NFU1Q9UMS0 254 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 SBNO2Q9Y2G9 1366 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.72■□□□□ 0.91
BPTF-201ENST00000306378 RHOBTB1O94844 696 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 ARL4CP56559 192 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 CAPRIN1Q14444 709 aaKnown RBP20.72■□□□□ 0.91
BPTF-201ENST00000306378 COG1Q8WTW3 980 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 MAPK8IP1Q9UQF2 711 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 PITPNM2Q9BZ72 1349 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 SOX6P35712 828 aa20.72■□□□□ 0.91
BPTF-201ENST00000306378 CAPN1P07384 714 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 ZNF713Q8N859 430 aaPredicted RBP20.71■□□□□ 0.91
BPTF-201ENST00000306378 CROCC2H7BZ55 1655 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 C2orf54Q08AI8 447 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 MAN2A1Q16706 1144 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 NCLNQ969V3 563 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 TMEM245Q9H330 911 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 KLHL31Q9H511 634 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 NOVA2Q9UNW9 492 aaKnown RBP20.71■□□□□ 0.91
BPTF-201ENST00000306378 LRRC63Q05C16 580 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 PDCLQ13371 301 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 TMEM259Q4ZIN3 620 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 LRIG3Q6UXM1 1119 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 CMTM5Q96DZ9 223 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 WWP1Q9H0M0 922 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 ARHGEF10LQ9HCE6 1279 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 SHANK2Q9UPX8 1470 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 CAPN9O14815 690 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 PYROXD1Q8WU10 500 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 TTLL3Q9Y4R7 772 aa20.71■□□□□ 0.91
BPTF-201ENST00000306378 SPOPLQ6IQ16 392 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 CCDC103Q8IW40 242 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 TRMT44Q8IYL2 757 aaKnown RBP20.7■□□□□ 0.9
BPTF-201ENST00000306378 FLCNQ8NFG4 579 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 DEPDC1BQ8WUY9 529 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 ETAA1Q9NY74 926 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 NLRC4Q9NPP4 1024 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 UBAP1Q9NZ09 502 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 CARMIL3Q8ND23 1372 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 MFAP3P55082 362 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 CROCCP3Q8IVE0 287 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 SMYD2Q9NRG4 433 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 M0R3G1 203 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 COPEO14579 308 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 XPO1O14980 1071 aaKnown RBP20.7■□□□□ 0.9
BPTF-201ENST00000306378 HSPA4LO95757 839 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 PRPF18Q99633 342 aaKnown RBP20.7■□□□□ 0.9
BPTF-201ENST00000306378 PDE5AO76074 875 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 BRDTQ58F21 947 aaPredicted RBP20.7■□□□□ 0.9
BPTF-201ENST00000306378 TJP3O95049 919 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 PTK2Q05397 1052 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 KMT5BQ4FZB7 885 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 APPBP2Q92624 585 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 GAP43P17677 238 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 AARSP49588 968 aaKnown RBP eCLIP20.7■□□□□ 0.91e-5■■□□□ 14
BPTF-201ENST00000306378 ALCAMQ13740 583 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 CNOT6LQ96LI5 555 aaKnown RBP20.7■□□□□ 0.9
BPTF-201ENST00000306378 NACA2Q9H009 215 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 TXNDC2Q86VQ3 553 aa20.7■□□□□ 0.9
BPTF-201ENST00000306378 GCOM2Q9BZD3 368 aaPredicted RBP20.7■□□□□ 0.9
BPTF-201ENST00000306378 SEC24BO95487 1268 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 TNNI1P19237 187 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 C16orf89Q6UX73 402 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 SLITRK6Q9H5Y7 841 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 TRADDQ15628 312 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 ELAC2Q9BQ52 826 aaKnown RBP20.69■□□□□ 0.9
BPTF-201ENST00000306378 GCNT4Q9P109 453 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 PRG3Q9Y2Y8 225 aaPredicted RBP20.69■□□□□ 0.9
BPTF-201ENST00000306378 DYTNA2CJ06 578 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 ZNF233A6NK53 670 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 H7C0S8 307 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 NHEJ1Q9H9Q4 299 aaPredicted RBP20.69■□□□□ 0.9
BPTF-201ENST00000306378 ATAD3AQ9NVI7 634 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 FOXP1Q9H334 677 aaPredicted RBP20.69■□□□□ 0.9
BPTF-201ENST00000306378 PDE6AP16499 860 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 CC2D2BQ6DHV5 1058 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 BBS5Q8N3I7 341 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 GOLPH3LQ9H4A5 285 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 TRPM2O94759 1503 aa20.69■□□□□ 0.9
BPTF-201ENST00000306378 ALKBH8Q96BT7 664 aaKnown RBP20.69■□□□□ 0.9
BPTF-201ENST00000306378 MAGOHP61326 146 aaKnown RBP20.68■□□□□ 0.9
BPTF-201ENST00000306378 ZFRQ96KR1 1074 aaKnown RBP20.68■□□□□ 0.9
BPTF-201ENST00000306378 CNPY3Q9BT09 278 aa20.68■□□□□ 0.9
BPTF-201ENST00000306378 TAF1DQ9H5J8 278 aaPredicted RBP20.68■□□□□ 0.9
BPTF-201ENST00000306378 EML4Q9HC35 981 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms