RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 FOXD4L3Q6VB84 417 aaPredicted RBP27.62■■■□□ 2.01
HOXC9-201ENST00000303450 SMAP1Q8IYB5 467 aaPredicted RBP27.62■■■□□ 2.01
HOXC9-201ENST00000303450 C4orf32Q8N8J7 132 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 ZNF396Q96N95 335 aaPredicted RBP27.62■■■□□ 2.01
HOXC9-201ENST00000303450 UNC45AQ9H3U1 944 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 TTC12Q9H892 705 aaPredicted RBP27.62■■■□□ 2.01
HOXC9-201ENST00000303450 CEP131Q9UPN4 1083 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 SAMM50Q9Y512 469 aa27.62■■■□□ 2.01
HOXC9-201ENST00000303450 GSTTP1A0A1W2PQM5 241 aa27.61■■■□□ 2.01
HOXC9-201ENST00000303450 BMP15O95972 392 aa27.61■■■□□ 2.01
HOXC9-201ENST00000303450 HOXD8P13378 290 aaPredicted RBP27.61■■■□□ 2.01
HOXC9-201ENST00000303450 TCF7P36402 384 aaPredicted RBP27.61■■■□□ 2.01
HOXC9-201ENST00000303450 MNX1P50219 401 aaPredicted RBP27.61■■■□□ 2.01
HOXC9-201ENST00000303450 PURAQ00577 322 aaKnown RBP27.61■■■□□ 2.01
HOXC9-201ENST00000303450 CXCL17Q6UXB2 119 aa27.61■■■□□ 2.01
HOXC9-201ENST00000303450 PHF24Q9UPV7 400 aa27.61■■■□□ 2.01
HOXC9-201ENST00000303450 WDR64B1ANS9 1081 aa27.6■■■□□ 2.01
HOXC9-201ENST00000303450 DIS3LQ8TF46 1054 aaKnown RBP27.6■■■□□ 2.01
HOXC9-201ENST00000303450 FERMT2Q96AC1 680 aa27.6■■■□□ 2.01
HOXC9-201ENST00000303450 VAV3Q9UKW4 847 aa27.6■■■□□ 2.01
HOXC9-201ENST00000303450 CLIC4Q9Y696 253 aa27.6■■■□□ 2.01
HOXC9-201ENST00000303450 MYH15Q9Y2K3 1946 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 ZNF286BP0CG31 522 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 SFNP31947 248 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 JAK3P52333 1124 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 ATP2C1P98194 919 aaPredicted RBP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 CEBPZQ03701 1054 aaKnown RBP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 PPP2R5CQ13362 524 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 UTP14CQ5TAP6 766 aaKnown RBP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 MIS18BP1Q6P0N0 1132 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 VTI1AQ96AJ9 217 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 PAWRQ96IZ0 340 aaKnown RBP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 GLT1D1Q96MS3 346 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 MTG1Q9BT17 334 aaPredicted RBP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 FTOQ9C0B1 505 aaKnown RBP eCLIP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 DISC1Q9NRI5 854 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 CIZ1Q9ULV3 898 aaPredicted RBP27.59■■■□□ 2.01
HOXC9-201ENST00000303450 PCDHA10Q9Y5I2 948 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 ATP6V1DQ9Y5K8 247 aa27.59■■■□□ 2.01
HOXC9-201ENST00000303450 CABYRO75952 493 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 ATG7O95352 703 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 LGALS2P05162 132 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 B3GNT9Q6UX72 402 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 ABHD15Q6UXT9 468 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 MIER3Q7Z3K6 550 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 USP28Q96RU2 1077 aa27.58■■■□□ 2.01
HOXC9-201ENST00000303450 SENP6Q9GZR1 1112 aaPredicted RBP27.58■■■□□ 2.01
HOXC9-201ENST00000303450 A0A1W2PQ45 241 aaPredicted RBP27.57■■■□□ 2
HOXC9-201ENST00000303450 A0A1W2PQY0 241 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 PSAPP07602 524 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 SUPT20HL2P0C7V6 817 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 PRPHP41219 470 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 TMEM266Q2M3C6 531 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 NECAB2Q7Z6G3 386 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 AZI2Q9H6S1 392 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 BACH1O14867 736 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 TECP42680 631 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 NCAPH2Q6IBW4 605 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 RDM1Q8NG50 284 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 GLG1Q92896 1179 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 C11orf49Q9H6J7 331 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 STARD7Q9NQZ5 370 aa27.57■■■□□ 2
HOXC9-201ENST00000303450 TFIP11Q9UBB9 837 aaKnown RBP27.57■■■□□ 2
HOXC9-201ENST00000303450 SPIRE1Q08AE8 756 aa27.56■■■□□ 2
HOXC9-201ENST00000303450 ARL6IP4Q66PJ3 421 aaKnown RBP27.56■■■□□ 2
HOXC9-201ENST00000303450 DTHD1Q6ZMT9 781 aa27.56■■■□□ 2
HOXC9-201ENST00000303450 C16orf70Q9BSU1 422 aa27.56■■■□□ 2
HOXC9-201ENST00000303450 SMARCAD1Q9H4L7 1026 aa27.56■■■□□ 2
HOXC9-201ENST00000303450 ZNF215Q9UL58 517 aaPredicted RBP27.56■■■□□ 2
HOXC9-201ENST00000303450 COL6A1P12109 1028 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 CHMP4BP1P59074 171 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 FAM160B1Q5W0V3 765 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 ATL3Q6DD88 541 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 SWSAP1Q6NVH7 229 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 TRIM50Q86XT4 487 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 KATNAL1Q9BW62 490 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 EMSYQ7Z589 1322 aa27.55■■■□□ 2
HOXC9-201ENST00000303450 H3BRB1 525 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 EML1O00423 815 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 LGR5O75473 907 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 F2P00734 622 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 FXR2P51116 673 aaKnown RBP eCLIP27.54■■■□□ 2
HOXC9-201ENST00000303450 STAT5BP51692 787 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 DNM1Q05193 864 aaKnown RBP27.54■■■□□ 2
HOXC9-201ENST00000303450 PTPAQ15257 358 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 KAT2BQ92831 832 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 PCYT2Q99447 389 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 RAB34Q9BZG1 259 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 TUT1Q9H6E5 874 aaKnown RBP27.54■■■□□ 2
HOXC9-201ENST00000303450 ZNF302Q9NR11 478 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 CFAP45Q9UL16 551 aa27.54■■■□□ 2
HOXC9-201ENST00000303450 IGKV6D-21A0A0A0MT36 114 aa27.53■■■□□ 2
HOXC9-201ENST00000303450 POTEMA6NI47 508 aa27.53■■■□□ 2
HOXC9-201ENST00000303450 NASPP49321 788 aaPredicted RBP27.53■■■□□ 2
HOXC9-201ENST00000303450 PSMC6P62333 389 aa27.53■■■□□ 2
HOXC9-201ENST00000303450 STK38Q15208 465 aa27.53■■■□□ 2
HOXC9-201ENST00000303450 CCDC60Q8IWA6 550 aaPredicted RBP27.53■■■□□ 2
HOXC9-201ENST00000303450 ERAP1Q9NZ08 941 aa27.53■■■□□ 2
HOXC9-201ENST00000303450 CHMP5Q9NZZ3 219 aa27.53■■■□□ 2
HOXC9-201ENST00000303450 PSEN2P49810 448 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms