RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 LRRC41Q15345 812 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 BMT2Q1RMZ1 405 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 ANGEL2Q5VTE6 544 aaKnown RBP21.53■■□□□ 1.04
HOXC4-201ENST00000303406 PCNX4Q63HM2 1172 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 ARHGAP27Q6ZUM4 889 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 UIMC1Q96RL1 719 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 KCTD10Q9H3F6 313 aa21.53■■□□□ 1.04
HOXC4-201ENST00000303406 RPAP3Q9H6T3 665 aaPredicted RBP21.53■■□□□ 1.04
HOXC4-201ENST00000303406 PHIPQ8WWQ0 1821 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 SLITRK3O94933 977 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 PTPRAP18433 802 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 ZBED6P86452 979 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 TSR1Q2NL82 804 aaKnown RBP21.52■■□□□ 1.04
HOXC4-201ENST00000303406 EPM2AIP1Q7L775 607 aaPredicted RBP21.52■■□□□ 1.04
HOXC4-201ENST00000303406 SCFD1Q8WVM8 642 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 REEP2Q9BRK0 252 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 NDST4Q9H3R1 872 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.52■■□□□ 1.04
HOXC4-201ENST00000303406 CTDP1Q9Y5B0 961 aaPredicted RBP21.52■■□□□ 1.04
HOXC4-201ENST00000303406 COL4A3BPQ9Y5P4 624 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 UBIAD1Q9Y5Z9 338 aa21.52■■□□□ 1.04
HOXC4-201ENST00000303406 NPHP3-ACAD11A0A0J9YXS1 232 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 RNF225M0QZC1 329 aaPredicted RBP21.51■■□□□ 1.03
HOXC4-201ENST00000303406 PES1O00541 588 aaKnown RBP21.51■■□□□ 1.03
HOXC4-201ENST00000303406 NFIBO00712 420 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 ARP10275 920 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 ERVK-24P63145 666 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 SPP2Q13103 211 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 MEA1Q16626 185 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 XRRA1Q6P2D8 792 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 MTERF4Q7Z6M4 381 aaKnown RBP21.51■■□□□ 1.03
HOXC4-201ENST00000303406 GLIS3Q8NEA6 775 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 SYTL5Q8TDW5 730 aaPredicted RBP21.51■■□□□ 1.03
HOXC4-201ENST00000303406 NACC1Q96RE7 527 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 EDEM3Q9BZQ6 932 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 BHMT2Q9H2M3 363 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 RAVER2Q9HCJ3 691 aaKnown RBP21.51■■□□□ 1.03
HOXC4-201ENST00000303406 OLFML3Q9NRN5 406 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 COL20A1Q9P218 1284 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 TRAF3IP3Q9Y228 551 aa21.51■■□□□ 1.03
HOXC4-201ENST00000303406 IPO5O00410 1097 aaKnown RBP21.5■■□□□ 1.03
HOXC4-201ENST00000303406 ALAS1P13196 640 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 CDK17Q00537 523 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 CYP4A11Q02928 519 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 MTF1Q14872 753 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 TRPM4Q8TD43 1214 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 DYDC2Q96IM9 177 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 WRNIP1Q96S55 665 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 UNC45AQ9H3U1 944 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 JADE2Q9NQC1 790 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 RGL1Q9NZL6 768 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 VWA5AO00534 786 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 TBCAO75347 108 aaKnown RBP21.5■■□□□ 1.03
HOXC4-201ENST00000303406 UBXN2AP68543 259 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 SUPT20HL1Q3ZLR7 823 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 RINT1Q6NUQ1 792 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 SAMD1Q6SPF0 538 aaPredicted RBP21.5■■□□□ 1.03
HOXC4-201ENST00000303406 KLRG1Q96E93 195 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 MAP7D2Q96T17 732 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 SEL1LQ9UBV2 794 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 DNAI1Q9UI46 699 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 ADAMTS5Q9UNA0 930 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 SIK3Q9Y2K2 1263 aa21.5■■□□□ 1.03
HOXC4-201ENST00000303406 RLFQ13129 1914 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 UBE4BO95155 1302 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 MYPNQ86TC9 1320 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 RASSF10A6NK89 507 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 TRAF5O00463 557 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 SLU7O95391 586 aaKnown RBP21.49■■□□□ 1.03
HOXC4-201ENST00000303406 ITGB5P18084 799 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 TRIM21P19474 475 aaKnown RBP21.49■■□□□ 1.03
HOXC4-201ENST00000303406 C1orf186Q6ZWK4 172 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 ZNF397Q8NF99 534 aaPredicted RBP21.49■■□□□ 1.03
HOXC4-201ENST00000303406 REPS2Q8NFH8 660 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 ERO1AQ96HE7 468 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 DESI2Q9BSY9 194 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 FGFBP2Q9BYJ0 223 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 FAM184BQ9ULE4 1060 aa21.49■■□□□ 1.03
HOXC4-201ENST00000303406 SSC5DA1L4H1 1573 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 PDXKO00764 312 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 ATP2A1O14983 1001 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 EIF3DO15371 548 aaKnown RBP eCLIP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 HNRNPH3P31942 346 aaKnown RBP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 DSG3P32926 999 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 CTTNQ14247 550 aaKnown RBP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 TKFCQ3LXA3 575 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 MUM1L1Q5H9M0 696 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 SFR1Q86XK3 245 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 CPXCR1Q8N123 301 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 UPF1Q92900 1129 aaKnown RBP eCLIP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 RUSC1Q9BVN2 902 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 MRPL44Q9H9J2 332 aaKnown RBP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 AGO4Q9HCK5 861 aaKnown RBP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 ZNHIT6Q9NWK9 470 aaKnown RBP21.48■■□□□ 1.03
HOXC4-201ENST00000303406 GGA3Q9NZ52 723 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 ODF2LQ9ULJ1 636 aa21.48■■□□□ 1.03
HOXC4-201ENST00000303406 CETN3O15182 167 aa21.47■■□□□ 1.03
HOXC4-201ENST00000303406 CALUO43852 315 aaPredicted RBP21.47■■□□□ 1.03
HOXC4-201ENST00000303406 CACNB1Q02641 598 aaPredicted RBP21.47■■□□□ 1.03
HOXC4-201ENST00000303406 PPP2R3AQ06190 1150 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms