RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 VPS16Q9H269 839 aa24.81■■□□□ 1.56
SMAD1-201ENST00000302085 AGO4Q9HCK5 861 aaKnown RBP24.81■■□□□ 1.56
SMAD1-201ENST00000302085 FRMD3A2A2Y4 597 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 ILDR2Q71H61 639 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 ANKRD20A12PQ8NF67 263 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 BHMT2Q9H2M3 363 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 PKD2L1Q9P0L9 805 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 N4BP3O15049 544 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 MYCLP12524 364 aaPredicted RBP24.8■■□□□ 1.56
SMAD1-201ENST00000302085 EEF1GP26641 437 aaKnown RBP24.8■■□□□ 1.56
SMAD1-201ENST00000302085 PPATQ06203 517 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 FAM26FQ5R3K3 315 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 ARHGEF16Q5VV41 709 aa24.8■■□□□ 1.56
SMAD1-201ENST00000302085 IRF6O14896 467 aa24.79■■□□□ 1.56
SMAD1-201ENST00000302085 KRT18P05783 430 aaKnown RBP24.79■■□□□ 1.56
SMAD1-201ENST00000302085 NF2P35240 595 aa24.79■■□□□ 1.56
SMAD1-201ENST00000302085 ITGB3BPQ13352 177 aaPredicted RBP24.79■■□□□ 1.56
SMAD1-201ENST00000302085 ANKRD13AQ8IZ07 590 aa24.79■■□□□ 1.56
SMAD1-201ENST00000302085 FGFBP2Q9BYJ0 223 aa24.79■■□□□ 1.56
SMAD1-201ENST00000302085 TAF1DQ9H5J8 278 aaPredicted RBP24.79■■□□□ 1.56
SMAD1-201ENST00000302085 TBC1D7Q9P0N9 293 aa24.79■■□□□ 1.56
SMAD1-201ENST00000302085 PTPRFP10586 1907 aa24.79■■□□□ 1.56
SMAD1-201ENST00000302085 DDX39AO00148 427 aaKnown RBP24.78■■□□□ 1.56
SMAD1-201ENST00000302085 PLS1Q14651 629 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 HERC4Q5GLZ8 1057 aaPredicted RBP24.78■■□□□ 1.56
SMAD1-201ENST00000302085 ERO1BQ86YB8 467 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 PIGOQ8TEQ8 1089 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 OTUD5Q96G74 571 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 TMX1Q9H3N1 280 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 WRAP73Q9P2S5 460 aaPredicted RBP24.78■■□□□ 1.56
SMAD1-201ENST00000302085 ZBTB39O15060 712 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 MTMR1Q13613 665 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 MYOCDQ8IZQ8 938 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 EEF2KMTQ96G04 330 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 RUSC1Q9BVN2 902 aa24.78■■□□□ 1.56
SMAD1-201ENST00000302085 MUTP22033 750 aa24.77■■□□□ 1.56
SMAD1-201ENST00000302085 TTLL12Q14166 644 aaPredicted RBP24.77■■□□□ 1.56
SMAD1-201ENST00000302085 EAPPQ56P03 285 aaPredicted RBP24.77■■□□□ 1.56
SMAD1-201ENST00000302085 VSIG10LQ86VR7 867 aa24.77■■□□□ 1.56
SMAD1-201ENST00000302085 REEP2Q9BRK0 252 aa24.77■■□□□ 1.56
SMAD1-201ENST00000302085 ACAD9Q9H845 621 aa24.77■■□□□ 1.56
SMAD1-201ENST00000302085 CYP39A1Q9NYL5 469 aa24.77■■□□□ 1.56
SMAD1-201ENST00000302085 MAGEC2Q9UBF1 373 aaPredicted RBP24.77■■□□□ 1.56
SMAD1-201ENST00000302085 ZC3H4Q9UPT8 1303 aaKnown RBP24.77■■□□□ 1.56
SMAD1-201ENST00000302085 A0A0G2JLL6 359 aaPredicted RBP24.76■■□□□ 1.55
SMAD1-201ENST00000302085 XRRA1Q6P2D8 792 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.76■■□□□ 1.55
SMAD1-201ENST00000302085 GADL1Q6ZQY3 521 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 PRRT2Q7Z6L0 340 aaPredicted RBP24.76■■□□□ 1.55
SMAD1-201ENST00000302085 TC2NQ8N9U0 490 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 A1CFQ9NQ94 594 aaKnown RBP24.76■■□□□ 1.55
SMAD1-201ENST00000302085 SPDYE5A6NIY4 337 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 NR3C2P08235 984 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 RINT1Q6NUQ1 792 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 LBX2Q6XYB7 198 aa24.76■■□□□ 1.55
SMAD1-201ENST00000302085 CXCL11O14625 94 aa24.75■■□□□ 1.55
SMAD1-201ENST00000302085 PEX10O60683 326 aa24.75■■□□□ 1.55
SMAD1-201ENST00000302085 ADKP55263 362 aaKnown RBP24.75■■□□□ 1.55
SMAD1-201ENST00000302085 MIER3Q7Z3K6 550 aa24.75■■□□□ 1.55
SMAD1-201ENST00000302085 NACC1Q96RE7 527 aa24.75■■□□□ 1.55
SMAD1-201ENST00000302085 ZHX3Q9H4I2 956 aa24.75■■□□□ 1.55
SMAD1-201ENST00000302085 ATP9AO75110 1047 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 LRRC63Q05C16 580 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 CEP135Q66GS9 1140 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 FAM114A1Q8IWE2 563 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 PROCA1Q8NCQ7 364 aaPredicted RBP24.74■■□□□ 1.55
SMAD1-201ENST00000302085 NSUN6Q8TEA1 469 aaKnown RBP24.74■■□□□ 1.55
SMAD1-201ENST00000302085 TBC1D22BQ9NU19 505 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 BTBD7Q9P203 1132 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 GRIN3BO60391 1043 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 CCND2P30279 289 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 RBL2Q08999 1139 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 FOXR2Q6PJQ5 311 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 C1orf186Q6ZWK4 172 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 TMEM139Q8IV31 216 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 BANK1Q8NDB2 785 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 ZNF507Q8TCN5 953 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 CNOT6LQ96LI5 555 aaKnown RBP24.74■■□□□ 1.55
SMAD1-201ENST00000302085 MAF1Q9H063 256 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 KCNH4Q9UQ05 1017 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 ITIH6Q6UXX5 1313 aa24.74■■□□□ 1.55
SMAD1-201ENST00000302085 LGALS16A8MUM7 142 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 RSPH10B2B2RC85 870 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 RSPH10BP0C881 870 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 UBXN1Q04323 297 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 ZCWPW2Q504Y3 356 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 CCDC112Q8NEF3 446 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 SCFD1Q8WVM8 642 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 LXNQ9BS40 222 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 TUBGCP2Q9BSJ2 902 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 BCAS3Q9H6U6 928 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 POLD4Q9HCU8 107 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 IQCA1LA6NCM1 817 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 USP27XA6NNY8 438 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 SFR1Q86XK3 245 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 MB21D1Q8N884 522 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 CHST13Q8NET6 341 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 NEK9Q8TD19 979 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 KCND1Q9NSA2 647 aa24.73■■□□□ 1.55
SMAD1-201ENST00000302085 SCN4AP35499 1836 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms