RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 PTCRAQ6ISU1 281 aaPredicted RBP24.03■■□□□ 1.44
SMCO4-201ENST00000298966 CCDC62Q6P9F0 684 aa24.03■■□□□ 1.44
SMCO4-201ENST00000298966 GTF2IRD1Q9UHL9 959 aa24.03■■□□□ 1.44
SMCO4-201ENST00000298966 DEXIO95424 95 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 PDHBP11177 359 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 IL9P15248 144 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 RXRAP19793 462 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 MCM4P33991 863 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 AKAP17AQ02040 695 aaKnown RBP24.02■■□□□ 1.44
SMCO4-201ENST00000298966 FAM117BQ6P1L5 589 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 TMTC3Q6ZXV5 915 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 C7orf31Q8N865 590 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 FBXO22Q8NEZ5 403 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 KAT2BQ92831 832 aa24.02■■□□□ 1.44
SMCO4-201ENST00000298966 H3BQV1 296 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 PTMSP20962 102 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 ARHGAP1Q07960 439 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 ZNF543Q08ER8 600 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 TCTN1Q2MV58 587 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 PUS10Q3MIT2 529 aaKnown RBP24.01■■□□□ 1.43
SMCO4-201ENST00000298966 SEPT14Q6ZU15 432 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 ANP32EQ9BTT0 268 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 HDAC6Q9UBN7 1215 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 MTMR6Q9Y217 621 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 INSL6Q9Y581 213 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 KIAA1217Q5T5P2 1943 aa24.01■■□□□ 1.43
SMCO4-201ENST00000298966 PRPF3O43395 683 aaKnown RBP24■■□□□ 1.43
SMCO4-201ENST00000298966 FDPSP14324 419 aaKnown RBP24■■□□□ 1.43
SMCO4-201ENST00000298966 DGKDQ16760 1214 aa24■■□□□ 1.43
SMCO4-201ENST00000298966 LY6KQ17RY6 165 aa24■■□□□ 1.43
SMCO4-201ENST00000298966 USH1GQ495M9 461 aa24■■□□□ 1.43
SMCO4-201ENST00000298966 ASPRV1Q53RT3 343 aa24■■□□□ 1.43
SMCO4-201ENST00000298966 RAB11FIP4Q86YS3 637 aa24■■□□□ 1.43
SMCO4-201ENST00000298966 FAM177A1Q8N128 213 aaPredicted RBP24■■□□□ 1.43
SMCO4-201ENST00000298966 KATNAL1Q9BW62 490 aa24■■□□□ 1.43
SMCO4-201ENST00000298966 GRXCR2A6NFK2 248 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 DDX11L8A8MPP1 907 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 F13A1P00488 732 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 PARP1P09874 1014 aaKnown RBP23.99■■□□□ 1.43
SMCO4-201ENST00000298966 PSEN2P49810 448 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 PTK7Q13308 1070 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 PTPROQ16827 1216 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 ALG1Q9BT22 464 aa23.99■■□□□ 1.43
SMCO4-201ENST00000298966 ZSCAN16Q9H4T2 348 aaPredicted RBP23.99■■□□□ 1.43
SMCO4-201ENST00000298966 VPS37CA5D8V6 355 aaPredicted RBP23.98■■□□□ 1.43
SMCO4-201ENST00000298966 PALM3A6NDB9 673 aaPredicted RBP23.98■■□□□ 1.43
SMCO4-201ENST00000298966 GOLGA6L22H0YM25 854 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 BAG4O95429 457 aaKnown RBP23.98■■□□□ 1.43
SMCO4-201ENST00000298966 SNHG28P0DPA3 235 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 XBP1P17861 261 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 TRIM29Q14134 588 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 MRPL38Q96DV4 380 aaKnown RBP23.98■■□□□ 1.43
SMCO4-201ENST00000298966 C8orf76Q96K31 380 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 C17orf80Q9BSJ5 609 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 SLC26A6Q9BXS9 759 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 MAF1Q9H063 256 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 MICAL3Q7RTP6 2002 aa23.98■■□□□ 1.43
SMCO4-201ENST00000298966 LGR5O75473 907 aa23.97■■□□□ 1.43
SMCO4-201ENST00000298966 AMHP03971 560 aa23.97■■□□□ 1.43
SMCO4-201ENST00000298966 FUT2Q10981 343 aa23.97■■□□□ 1.43
SMCO4-201ENST00000298966 STXBP2Q15833 593 aa23.97■■□□□ 1.43
SMCO4-201ENST00000298966 GPATCH4Q5T3I0 446 aaKnown RBP23.97■■□□□ 1.43
SMCO4-201ENST00000298966 NSUN6Q8TEA1 469 aaKnown RBP23.97■■□□□ 1.43
SMCO4-201ENST00000298966 MYH15Q9Y2K3 1946 aa23.97■■□□□ 1.43
SMCO4-201ENST00000298966 MYH7BA7E2Y1 1941 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 DCXO43602 365 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 MRE11P49959 708 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 NBR1Q14596 966 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 MFSD10Q14728 455 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 TRIM71Q2Q1W2 868 aaKnown RBP23.96■■□□□ 1.43
SMCO4-201ENST00000298966 TIGD5Q53EQ6 642 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 ZNF618Q5T7W0 954 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.96■■□□□ 1.43
SMCO4-201ENST00000298966 MYOCDQ8IZQ8 938 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 FBXO18Q8NFZ0 1043 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 NEK9Q8TD19 979 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 SAMD11Q96NU1 681 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 TAAR1Q96RJ0 339 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 IWS1Q96ST2 819 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 SPZ1Q9BXG8 430 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 MAD2L2Q9UI95 211 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 FAM50BQ9Y247 325 aa23.96■■□□□ 1.43
SMCO4-201ENST00000298966 ABCB11O95342 1321 aa23.95■■□□□ 1.42
SMCO4-201ENST00000298966 EMSYQ7Z589 1322 aa23.95■■□□□ 1.42
SMCO4-201ENST00000298966 CNTNAP5Q8WYK1 1306 aa23.95■■□□□ 1.42
SMCO4-201ENST00000298966 KIAA0753Q2KHM9 967 aa23.95■■□□□ 1.42
SMCO4-201ENST00000298966 TRAF7Q6Q0C0 670 aa23.95■■□□□ 1.42
SMCO4-201ENST00000298966 SYTL5Q8TDW5 730 aaPredicted RBP23.95■■□□□ 1.42
SMCO4-201ENST00000298966 PHKBQ93100 1093 aa23.95■■□□□ 1.42
SMCO4-201ENST00000298966 H3BQ06 376 aaPredicted RBP23.94■■□□□ 1.42
SMCO4-201ENST00000298966 F2P00734 622 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 HTRA4P83105 476 aaPredicted RBP23.94■■□□□ 1.42
SMCO4-201ENST00000298966 LAMC2Q13753 1193 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 MBTPS1Q14703 1052 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 MCF2L2Q86YR7 1114 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 TBC1D5Q92609 795 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 EMID1Q96A84 441 aaPredicted RBP23.94■■□□□ 1.42
SMCO4-201ENST00000298966 RMDN3Q96TC7 470 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 KCNH6Q9H252 994 aa23.94■■□□□ 1.42
SMCO4-201ENST00000298966 DDX41Q9UJV9 622 aaKnown RBP23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 428.9 ms