RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 BANK1Q8NDB2 785 aa28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 RNF225M0QZC1 329 aaPredicted RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 ATP9AO75110 1047 aa28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 CASP5P51878 434 aa28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 GPR162Q16538 588 aa28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 EAPPQ56P03 285 aaPredicted RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 SH3D19Q5HYK7 790 aa28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 E4F1Q66K89 784 aaPredicted RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 GUF1Q8N442 669 aaKnown RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 C16orf45Q96MC5 204 aaPredicted RBP28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 CSADQ9Y600 493 aa28.53■■■□□ 2.16
SDCCAG3-201ENST00000298537 PAPPA2Q9BXP8 1791 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 FRMPD4Q14CM0 1322 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 FILIP1LQ4L180 1135 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 NELFCDQ8IXH7 590 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 L3MBTL3Q96JM7 780 aaPredicted RBP28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 TEKT3Q9BXF9 490 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 TMX1Q9H3N1 280 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 SPAG1Q07617 926 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 AGO4Q9HCK5 861 aaKnown RBP28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 RABGAP1Q9Y3P9 1069 aa28.52■■■□□ 2.16
SDCCAG3-201ENST00000298537 BICDL2A1A5D9 508 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 SLC26A4O43511 780 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 ARHGEF16Q5VV41 709 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 CNOT6LQ96LI5 555 aaKnown RBP28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 PTPRFP10586 1907 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 FRMD3A2A2Y4 597 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 SFI1A8K8P3 1242 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 MTMR1Q13613 665 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 CCDC65Q8IXS2 484 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 JADE2Q9NQC1 790 aa28.51■■■□□ 2.15
SDCCAG3-201ENST00000298537 PES1O00541 588 aaKnown RBP28.5■■■□□ 2.15
SDCCAG3-201ENST00000298537 POTEJP0CG39 1038 aa28.5■■■□□ 2.15
SDCCAG3-201ENST00000298537 FDX1P10109 184 aa28.5■■■□□ 2.15
SDCCAG3-201ENST00000298537 UBXN1Q04323 297 aa28.5■■■□□ 2.15
SDCCAG3-201ENST00000298537 B4DLN1 442 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 EYA4O95677 639 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 GYPCP04921 128 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 FXR1P51114 621 aaKnown RBP eCLIP28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 PSMD2Q13200 908 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 TTLL12Q14166 644 aaPredicted RBP28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 MYOCDQ8IZQ8 938 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 TEX13BQ9BXU2 312 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 R3HDMLQ9H3Y0 253 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 A1CFQ9NQ94 594 aaKnown RBP28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 TESPA1A2RU30 521 aaPredicted RBP28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 BCRP11274 1271 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 CASP14P31944 242 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 RINT1Q6NUQ1 792 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 GADL1Q6ZQY3 521 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 SFR1Q86XK3 245 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 SCFD1Q8WVM8 642 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 LXNQ9BS40 222 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 TUFT1Q9NNX1 390 aa28.49■■■□□ 2.15
SDCCAG3-201ENST00000298537 EEF1GP26641 437 aaKnown RBP28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 USP50Q70EL3 339 aaPredicted RBP28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 CCAR2Q8N163 923 aaKnown RBP28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 RIT2Q99578 217 aa28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 TUBGCP2Q9BSJ2 902 aa28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 BTBD7Q9P203 1132 aa28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 MAP3K20Q9NYL2 800 aaKnown RBP28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 TELO2Q9Y4R8 837 aa28.48■■■□□ 2.15
SDCCAG3-201ENST00000298537 IREB2P48200 963 aaKnown RBP28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 OAZ1P54368 228 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 EPHA7Q15375 998 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 LRRC55Q6ZSA7 311 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 ANKRD20A12PQ8NF67 263 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 RBM46Q8TBY0 533 aaKnown RBP28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 ZNF507Q8TCN5 953 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 SH2D3AQ9BRG2 576 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 HOXC10Q9NYD6 342 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 CYP39A1Q9NYL5 469 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 MAGEC2Q9UBF1 373 aaPredicted RBP28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 KLK7P49862 253 aa28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 TRMT1LQ7Z2T5 733 aaKnown RBP28.47■■■□□ 2.15
SDCCAG3-201ENST00000298537 GLTPD2A6NH11 291 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 LGALS16A8MUM7 142 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 PPP1R2P41236 205 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 ZCWPW2Q504Y3 356 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 MIIPQ5JXC2 388 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 MIER3Q7Z3K6 550 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 FSTL1Q12841 308 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 MB21D1Q8N884 522 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 TAF1DQ9H5J8 278 aaPredicted RBP28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 STK24Q9Y6E0 443 aa28.46■■■□□ 2.15
SDCCAG3-201ENST00000298537 TMEM150BA6NC51 233 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 AKR1B15C9JRZ8 316 aaPredicted RBP28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 ATP2A1O14983 1001 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 RGS20O76081 388 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 NR3C2P08235 984 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 MYBP10242 640 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 NIPA1Q7RTP0 329 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 NOC3LQ8WTT2 800 aaKnown RBP28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 BAG1Q99933 345 aaPredicted RBP28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 GTPBP4Q9BZE4 634 aaKnown RBP28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 ACAD9Q9H845 621 aa28.45■■■□□ 2.14
SDCCAG3-201ENST00000298537 MTIF2P46199 727 aaKnown RBP28.44■■■□□ 2.14
SDCCAG3-201ENST00000298537 MTF1Q14872 753 aa28.44■■■□□ 2.14
SDCCAG3-201ENST00000298537 C1orf186Q6ZWK4 172 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms