RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 COG2Q14746 738 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 TMEM132BQ14DG7 1078 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 PGM5Q15124 567 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 SH3D19Q5HYK7 790 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 NIPA1Q7RTP0 329 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 REXO1L1PQ8IX06 675 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 PIGOQ8TEQ8 1089 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 CPLX3Q8WVH0 158 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 SCFD1Q8WVM8 642 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 CNOT6LQ96LI5 555 aaKnown RBP15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 REEP2Q9BRK0 252 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 RUSC1Q9BVN2 902 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 BHMT2Q9H2M3 363 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 KCTD10Q9H3F6 313 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 TBC1D7Q9P0N9 293 aa15.11■□□□□ 0.01
CHMP4C-201ENST00000297265 ADM5C9JUS6 153 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 CHMP2AO43633 222 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 GAS7O60861 476 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 CASP5P51878 434 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 LRRC63Q05C16 580 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 ITGB3BPQ13352 177 aaPredicted RBP15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 VGLL4Q14135 290 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 TKFCQ3LXA3 575 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 HERC4Q5GLZ8 1057 aaPredicted RBP15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 RINT1Q6NUQ1 792 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 CCDC65Q8IXS2 484 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 MYOCDQ8IZQ8 938 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 ANKRD20A12PQ8NF67 263 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 RIT2Q99578 217 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 OTOFQ9HC10 1997 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 A0A1W2PQC6 194 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 RSPH10B2B2RC85 870 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 B4DLN1 442 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 ATP2A1O14983 1001 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 RSPH10BP0C881 870 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 HOXD13P35453 343 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 OAZ1P54368 228 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 C9orf131Q5VYM1 1079 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 TPH2Q8IWU9 490 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 CNKSR2Q8WXI2 1034 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 POLD4Q9HCU8 107 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 JADE2Q9NQC1 790 aa15.1■□□□□ 0.01
CHMP4C-201ENST00000297265 MAP3K9P80192 1104 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 BAATQ14032 418 aaPredicted RBP15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 MTF1Q14872 753 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 EPHA7Q15375 998 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 RNF207Q6ZRF8 634 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 C1orf186Q6ZWK4 172 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 EPM2AIP1Q7L775 607 aaPredicted RBP15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 KRT26Q7Z3Y9 468 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 PPFIBP1Q86W92 1011 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 PDCD2LQ9BRP1 358 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 AGO4Q9HCK5 861 aaKnown RBP15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 PXMP2Q9NR77 195 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 RNF146Q9NTX7 359 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 PNMA2Q9UL42 364 aa15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.09■□□□□ 0.01
CHMP4C-201ENST00000297265 SPDYE16A6NNV3 312 aaPredicted RBP15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 EIF2AK2P19525 551 aaKnown RBP15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 MUTP22033 750 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 DNM2P50570 870 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 PTPN14Q15678 1187 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 TOGARAM2Q6ZUX3 1019 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 RMDN3Q96TC7 470 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 TEKT3Q9BXF9 490 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 TTYH3Q9C0H2 523 aa15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 MAGEC2Q9UBF1 373 aaPredicted RBP15.08■□□□□ 0.01
CHMP4C-201ENST00000297265 TTC26A0AVF1 554 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 NRDCO43847 1150 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 ATP9AO75110 1047 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 PRKCSHP14314 528 aaPredicted RBP15.08■□□□□ 0
CHMP4C-201ENST00000297265 KLK7P49862 253 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 SNRNP48Q6IEG0 339 aaKnown RBP15.08■□□□□ 0
CHMP4C-201ENST00000297265 RAD9BQ6WBX8 426 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 NSMFQ6X4W1 530 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 FAM114A1Q8IWE2 563 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 ZC3H3Q8IXZ2 948 aaKnown RBP15.08■□□□□ 0
CHMP4C-201ENST00000297265 MYRIPQ8NFW9 859 aa15.08■□□□□ 0
CHMP4C-201ENST00000297265 SOWAHDA6NJG2 315 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 TREML2Q5T2D2 321 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 TRIM65Q6PJ69 517 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 SFR1Q86XK3 245 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 CNGA4Q8IV77 575 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 DCPSQ96C86 337 aaKnown RBP15.07■□□□□ 0
CHMP4C-201ENST00000297265 FIZ1Q96SL8 496 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 ABHD10Q9NUJ1 306 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 PKD2L1Q9P0L9 805 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 PPP2R2CQ9Y2T4 447 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 LCTP09848 1927 aa15.07■□□□□ 0
CHMP4C-201ENST00000297265 FANCGO15287 622 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 ERVK-24P63145 666 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 FKBP3Q00688 224 aaKnown RBP15.06■□□□□ 0
CHMP4C-201ENST00000297265 TBC1D8BQ0IIM8 1120 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 MTMR1Q13613 665 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 VSIG10LQ86VR7 867 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 NELFCDQ8IXH7 590 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 BANK1Q8NDB2 785 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 CCDC51Q96ER9 411 aa15.06■□□□□ 0
CHMP4C-201ENST00000297265 L3MBTL3Q96JM7 780 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms