RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 WHAMMQ8TF30 809 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 LMBR1Q8WVP7 490 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 TTYH3Q9C0H2 523 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 NYXQ9GZU5 481 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 PSTPIP2Q9H939 334 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 KIF1AQ12756 1690 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 PVALEFA0A1B0GWK0 134 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L15C9J2P7 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L13C9JLJ4 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L11C9JVI0 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L18D6R9N7 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L22D6RA61 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L17D6RBQ6 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L19D6RCP7 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L20D6RJB6 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 GFPT2O94808 682 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 STAT3P40763 770 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L24Q0WX57 530 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 GLE1Q53GS7 698 aaKnown RBP13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 PRR16Q569H4 304 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 USP17L6PQ6QN14 398 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 ZMYND12Q9H0C1 365 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 HDAC9Q9UKV0 1011 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 SIK3Q9Y2K2 1263 aa13.77□□□□□ -0.21
TMEM200A-201ENST00000296978 GOLGA6L10A0A0M3HER8 536 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 PGRMC1O00264 195 aaKnown RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 BUB1BO60566 1050 aaPredicted RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 PLA2G4BP0C869 781 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 SLC9A1P19634 815 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 RASA1P20936 1047 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 MDH1P40925 334 aaKnown RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 SLCO1A2P46721 670 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 MAGOHP61326 146 aaKnown RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 MGARPQ8TDB4 240 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 MAGOHBQ96A72 148 aaKnown RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 TBC1D31Q96DN5 1066 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 EPN3Q9H201 632 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 TAF1DQ9H5J8 278 aaPredicted RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 RNF14Q9UBS8 474 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 FBXL5Q9UKA1 691 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 C4AP0C0L4 1744 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 C4BP0C0L5 1744 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 SART1O43290 800 aaKnown RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 RFC4P35249 363 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 MAP2K1Q02750 393 aaPredicted RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 EP400NLQ6ZTU2 488 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 MAEAQ7L5Y9 396 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 KSR1Q8IVT5 923 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 KAT2BQ92831 832 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 CUL5Q93034 780 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 CELF4Q9BZC1 486 aaKnown RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 CD248Q9HCU0 757 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 ZNF233A6NK53 670 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 HMGB1P1B2RPK0 211 aaPredicted RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 GBP2P32456 591 aaPredicted RBP13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 COPB2P35606 906 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 PLTPP55058 493 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 SLC18A3Q16572 532 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 BCS1LQ9Y276 419 aa13.76□□□□□ -0.21
TMEM200A-201ENST00000296978 KCPQ6ZWJ8 1503 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 SNAP25P60880 206 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 PPP1R7Q15435 360 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 FIGNQ5HY92 759 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 SYCP3Q8IZU3 236 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 CTNNBL1Q8WYA6 563 aaPredicted RBP13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 BLOC1S4Q9NUP1 217 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 NID2Q14112 1375 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 POTEFA5A3E0 1075 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 CTNND1O60716 968 aaKnown RBP13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 RPSAP08865 295 aaKnown RBP13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 EPB41P11171 864 aaKnown RBP13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 ZNF211Q13398 564 aaPredicted RBP13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 TTBK2Q6IQ55 1244 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 POTEGQ6S5H5 508 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 POTEEQ6S8J3 1075 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 AMFRQ9UKV5 643 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 MYH7P12883 1935 aa13.75□□□□□ -0.21
TMEM200A-201ENST00000296978 SSU72P8A0A1W2PR75 194 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 FGGP02679 453 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 PTK2Q05397 1052 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 MKRN4PQ13434 485 aaPredicted RBP13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 PTGISQ16647 500 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 GKAP1Q5VSY0 366 aaPredicted RBP13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 ERMNQ8TAM6 284 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 DNM3Q9UQ16 869 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 ADAMTSL3P82987 1691 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 PALM3A6NDB9 673 aaPredicted RBP13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 PHF20L1A8MW92 1017 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 TTI1O43156 1089 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 EZRP15311 586 aaKnown RBP13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 GRIK5Q16478 980 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 MYCBPAPQ8TBZ2 947 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 MMTAG2Q9BU76 263 aaKnown RBP13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 NT5C3AQ9H0P0 336 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 LRRN2O75325 713 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 CLTAP09496 248 aa13.74□□□□□ -0.21
TMEM200A-201ENST00000296978 CYP2J2P51589 502 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms