RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 IFIH1Q9BYX4 1025 aaKnown RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 UPF3BQ9BZI7 483 aaKnown RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 MAD2L2Q9UI95 211 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 ZNF215Q9UL58 517 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 MYH7BA7E2Y1 1941 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 POTEB3A0JP26 581 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 C5orf67F2Z3F1 127 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 H3BQ06 376 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 SORBS3O60504 671 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 PPP1R11O60927 126 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 SEC23AQ15436 765 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 TCEAL5Q5H9L2 206 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 POTEBQ6S5H4 581 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 FIBCD1Q8N539 461 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 IL31RAQ8NI17 732 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 INPP4AQ96PE3 977 aaPredicted RBP12.18□□□□□ -0.46
RFC4-201ENST00000296273 KIF2CQ99661 725 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 RIOX1Q9H6W3 641 aa12.18□□□□□ -0.46
RFC4-201ENST00000296273 C19orf67A6NJJ6 358 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 K7ELQ4 463 aaPredicted RBP12.17□□□□□ -0.46
RFC4-201ENST00000296273 FIBPO43427 364 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 CTSHP09668 335 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 PTMSP20962 102 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 ZP2Q05996 745 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 TRDNQ13061 729 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 FAM26DQ5JW98 314 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 EP400NLQ6ZTU2 488 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 ALYREFQ86V81 257 aaKnown RBP12.17□□□□□ -0.46
RFC4-201ENST00000296273 FCHSD1Q86WN1 690 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 HOMER1Q86YM7 354 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 ADHFE1Q8IWW8 467 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 UIMC1Q96RL1 719 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 POP1Q99575 1024 aaKnown RBP12.17□□□□□ -0.46
RFC4-201ENST00000296273 SENP7Q9BQF6 1050 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
RFC4-201ENST00000296273 CLDND1Q9NY35 253 aa12.17□□□□□ -0.46
RFC4-201ENST00000296273 RALGAPA2Q2PPJ7 1873 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 FRMPD4Q14CM0 1322 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 NRCAMQ92823 1304 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 PNMA6FA0A0J9YX94 578 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 SPATA31C2B4DYI2 1134 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 ADAM17P78536 824 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 GRM4Q14833 912 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 NFKBIBQ15653 356 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 TAF2Q6P1X5 1199 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 CYFIP1Q7L576 1253 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 GIMAP8Q8ND71 665 aaPredicted RBP12.16□□□□□ -0.46
RFC4-201ENST00000296273 GPKOWQ92917 476 aaPredicted RBP eCLIP12.16□□□□□ -0.467e-6■■■■■ 33.4
RFC4-201ENST00000296273 PIGSQ96S52 555 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 GPR20Q99678 358 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 SETD4Q9NVD3 440 aa12.16□□□□□ -0.46
RFC4-201ENST00000296273 ERICH2A1L162 156 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 RPLP2P05387 115 aaKnown RBP12.15□□□□□ -0.46
RFC4-201ENST00000296273 CTNNB1P35222 781 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 BMPR1AP36894 532 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 MRPS9P82933 396 aaKnown RBP12.15□□□□□ -0.46
RFC4-201ENST00000296273 NBR1Q14596 966 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 SMAD2Q15796 467 aaKnown RBP12.15□□□□□ -0.46
RFC4-201ENST00000296273 CTC1Q2NKJ3 1217 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 XRRA1Q6P2D8 792 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 RSPH3Q86UC2 560 aa12.15□□□□□ -0.46
RFC4-201ENST00000296273 ADGRA3Q8IWK6 1321 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 HSP90AA1P07900 732 aaKnown RBP12.14□□□□□ -0.47
RFC4-201ENST00000296273 LTBRP36941 435 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 ARHGAP4P98171 946 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 SART3Q15020 963 aaKnown RBP12.14□□□□□ -0.47
RFC4-201ENST00000296273 CYB5R4Q7L1T6 521 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 NLRX1Q86UT6 975 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 NLRC5Q86WI3 1866 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 LMBR1Q8WVP7 490 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 CLP1Q92989 425 aaKnown RBP12.14□□□□□ -0.47
RFC4-201ENST00000296273 PPP2R3CQ969Q6 453 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 ZFP91Q96JP5 570 aaPredicted RBP12.14□□□□□ -0.47
RFC4-201ENST00000296273 PLVAPQ9BX97 442 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 OSBPL7Q9BZF2 842 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 EHMT1Q9H9B1 1298 aa12.14□□□□□ -0.47
RFC4-201ENST00000296273 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
RFC4-201ENST00000296273 MBTPS2O43462 519 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 CYTH3O43739 400 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 MMP1P03956 469 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 IRS1P35568 1242 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 MRE11P49959 708 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 NHLH1Q02575 133 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 UTP14CQ5TAP6 766 aaKnown RBP12.13□□□□□ -0.47
RFC4-201ENST00000296273 PCNX4Q63HM2 1172 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 SMARCC2Q8TAQ2 1214 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 CUL5Q93034 780 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 CDHR1Q96JP9 859 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 MFSD14AQ96MC6 490 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 BCAS3Q9H6U6 928 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 RC3H2Q9HBD1 1191 aaKnown RBP12.13□□□□□ -0.47
RFC4-201ENST00000296273 RTEL1Q9NZ71 1219 aa12.13□□□□□ -0.47
RFC4-201ENST00000296273 PIK3CDO00329 1044 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 SGSM2O43147 1006 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 ABCB7O75027 752 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 CHRNA1P02708 482 aa12.12□□□□□ -0.47
RFC4-201ENST00000296273 LINC00271P0C7V0 271 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms