RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HSDL1Q3SXM5 330 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 PLIN2Q99541 437 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 GOLPH3LQ9H4A5 285 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 SAMM50Q9Y512 469 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 A0A087WWV3 80 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 LONP1P36776 959 aaKnown RBP17.04■□□□□ 0.32
CCDC140-201ENST00000295226 ACTR2P61160 394 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 PDIA5Q14554 519 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 MAP3K21Q5TCX8 1036 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 METTL7BQ6UX53 244 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 SPATA33Q96N06 139 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
CCDC140-201ENST00000295226 RGL1Q9NZL6 768 aa17.04■□□□□ 0.32
CCDC140-201ENST00000295226 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
CCDC140-201ENST00000295226 GH1P01241 217 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 AKR1A1P14550 325 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 MRE11P49959 708 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 CYP4A11Q02928 519 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 ECM1Q16610 540 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 RESP18Q5W5W9 173 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 FSIP1Q8NA03 581 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 ZNF579Q8NAF0 562 aaKnown RBP17.03■□□□□ 0.32
CCDC140-201ENST00000295226 OR6J1Q8NGC5 347 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 AFG1LQ8WV93 481 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 EIF2AK1Q9BQI3 630 aaKnown RBP17.03■□□□□ 0.32
CCDC140-201ENST00000295226 DISC1Q9NRI5 854 aa17.03■□□□□ 0.32
CCDC140-201ENST00000295226 A0A087X0B3 334 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 GSTTP1A0A1W2PQM5 241 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 CMA1P23946 247 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 KRT76Q01546 638 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 CTTNQ14247 550 aaKnown RBP17.02■□□□□ 0.32
CCDC140-201ENST00000295226 KARSQ15046 597 aaKnown RBP17.02■□□□□ 0.32
CCDC140-201ENST00000295226 SLC9C1Q4G0N8 1177 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 ZNF746Q6NUN9 644 aaPredicted RBP17.02■□□□□ 0.32
CCDC140-201ENST00000295226 TRMT1LQ7Z2T5 733 aaKnown RBP17.02■□□□□ 0.32
CCDC140-201ENST00000295226 PDILTQ8N807 584 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 GIMAP8Q8ND71 665 aaPredicted RBP17.02■□□□□ 0.32
CCDC140-201ENST00000295226 DYDC2Q96IM9 177 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 RAB34Q9BZG1 259 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 NRBP1Q9UHY1 535 aa17.02■□□□□ 0.32
CCDC140-201ENST00000295226 SEPT4O43236 478 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 MED24O75448 989 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 LIG1P18858 919 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 UBA7P41226 1012 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 NDUFA8P51970 172 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 UBE2HP62256 183 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 LAMC2Q13753 1193 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 MTFR1Q15390 333 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 UGCGQ16739 394 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 TLK2Q86UE8 772 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 CABP7Q86V35 215 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 BANK1Q8NDB2 785 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 SNX29Q8TEQ0 813 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 GPR20Q99678 358 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 GZF1Q9H116 711 aaPredicted RBP17.01■□□□□ 0.31
CCDC140-201ENST00000295226 TCEAL9Q9UHQ7 104 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 BRCA2P51587 3418 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 A0A1W2PQ27 194 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 A0A1W2PQ64 194 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 A0A1W2PQD8 194 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 WDR64B1ANS9 1081 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 NOP56O00567 594 aaKnown RBP17.01■□□□□ 0.31
CCDC140-201ENST00000295226 MBD3O95983 291 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 PGK1P00558 417 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 SPATA31C1P0DKV0 1188 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 PFKFB1P16118 471 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 CCT6AP40227 531 aaKnown RBP17.01■□□□□ 0.31
CCDC140-201ENST00000295226 BEX3Q00994 111 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 EPHA7Q15375 998 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 UTP14CQ5TAP6 766 aaKnown RBP17.01■□□□□ 0.31
CCDC140-201ENST00000295226 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 ABHD15Q6UXT9 468 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 CATSPER3Q86XQ3 398 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 AK8Q96MA6 479 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 UNC93B1Q9H1C4 597 aa17.01■□□□□ 0.31
CCDC140-201ENST00000295226 WRAP73Q9P2S5 460 aaPredicted RBP17.01■□□□□ 0.31
CCDC140-201ENST00000295226 POTEB3A0JP26 581 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 MYADML2A6NDP7 307 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 NKRFO15226 690 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC140-201ENST00000295226 SLITRK3O94933 977 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 MYCNP04198 464 aaPredicted RBP17■□□□□ 0.31
CCDC140-201ENST00000295226 TCF7P36402 384 aaPredicted RBP17■□□□□ 0.31
CCDC140-201ENST00000295226 KRT79Q5XKE5 535 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 FBXO46Q6PJ61 603 aaPredicted RBP17■□□□□ 0.31
CCDC140-201ENST00000295226 POTEBQ6S5H4 581 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 CCDC60Q8IWA6 550 aaPredicted RBP17■□□□□ 0.31
CCDC140-201ENST00000295226 TPH2Q8IWU9 490 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 GPT2Q8TD30 523 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 LRRC15Q8TF66 581 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 SEPT1Q8WYJ6 367 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 MRPS27Q92552 414 aaKnown RBP17■□□□□ 0.31
CCDC140-201ENST00000295226 PNMA5Q96PV4 448 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 PCYT2Q99447 389 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 HSD17B14Q9BPX1 270 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 HMX1Q9NP08 348 aaPredicted RBP17■□□□□ 0.31
CCDC140-201ENST00000295226 PCDHA10Q9Y5I2 948 aa17■□□□□ 0.31
CCDC140-201ENST00000295226 BACH1O14867 736 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 ZBTB39O15060 712 aa16.99■□□□□ 0.31
CCDC140-201ENST00000295226 DUSP11O75319 330 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms