RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 HOMER2Q9NSB8 354 aa18.7■□□□□ 0.58
CPSF4-201ENST00000292476 SAGE1Q9NXZ1 904 aa18.7■□□□□ 0.58
CPSF4-201ENST00000292476 FBXO40Q9UH90 709 aa18.7■□□□□ 0.58
CPSF4-201ENST00000292476 RPTORQ8N122 1335 aa18.7■□□□□ 0.58
CPSF4-201ENST00000292476 LRRC10BA6NIK2 292 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 TBC1D8O95759 1140 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 TPM1P09493 284 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 BCRP11274 1271 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 PLCG1P19174 1290 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 OSBPP22059 807 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 FECHP22830 423 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 COPB2P35606 906 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 SNAPC2Q13487 334 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 PCNX4Q63HM2 1172 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 SYTL5Q8TDW5 730 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 KBTBD4Q9NVX7 518 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 LIMA1Q9UHB6 759 aaKnown RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 PARP14Q460N5 1801 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 TESPA1A2RU30 521 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 PP2D1A8MPX8 630 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 RPS6P62753 249 aaKnown RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 TRIM14Q14142 442 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 TMEM132BQ14DG7 1078 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 MUM1L1Q5H9M0 696 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 COL13A1Q5TAT6 717 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 ZNF658Q5TYW1 1059 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 PPFIBP1Q86W92 1011 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 GTF3C2Q8WUA4 911 aaPredicted RBP18.69■□□□□ 0.58
CPSF4-201ENST00000292476 LENG9Q96B70 501 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
CPSF4-201ENST00000292476 CASP8AP2Q9UKL3 1982 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 IGLV3-22A0A075B6J6 115 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 MSH4O15457 936 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 CETPP11597 493 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 NAA30Q147X3 362 aaPredicted RBP18.68■□□□□ 0.58
CPSF4-201ENST00000292476 ELF2Q15723 593 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 HYIQ5T013 277 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 SV2BQ7L1I2 683 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 CNGA4Q8IV77 575 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 ANKRD20A12PQ8NF67 263 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 MXRA8Q9BRK3 442 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 MMTAG2Q9BU76 263 aaKnown RBP18.68■□□□□ 0.58
CPSF4-201ENST00000292476 WDR11Q9BZH6 1224 aa18.68■□□□□ 0.58
CPSF4-201ENST00000292476 LOC285556D6RIA3 1793 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 POTEMA6NI47 508 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 MEIS1O00470 390 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 H2AFXP16104 143 aaPredicted RBP18.67■□□□□ 0.58
CPSF4-201ENST00000292476 PAK1Q13153 545 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 KCNB1Q14721 858 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 NAALADL2Q58DX5 795 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 TREML2Q5T2D2 321 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 UTP14CQ5TAP6 766 aaKnown RBP18.67■□□□□ 0.58
CPSF4-201ENST00000292476 NSMFQ6X4W1 530 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 R3HDMLQ9H3Y0 253 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 PNMA3Q9UL41 463 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 RLFQ13129 1914 aa18.67■□□□□ 0.58
CPSF4-201ENST00000292476 CCDC175P0C221 793 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 PLS1Q14651 629 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 KMT5BQ4FZB7 885 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 ARHGEF16Q5VV41 709 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 KLHL10Q6JEL2 608 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 RMDN3Q96TC7 470 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 RIT2Q99578 217 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 PRDM10Q9NQV6 1147 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 CTNND2Q9UQB3 1225 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 RBBP6Q7Z6E9 1792 aaKnown RBP18.66■□□□□ 0.58
CPSF4-201ENST00000292476 PTPRFP10586 1907 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 EFCAB8A8MWE9 144 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 MFAP3LO75121 409 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 STAM2O75886 525 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 ALDH1A1P00352 501 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 RPN1P04843 607 aaKnown RBP18.66■□□□□ 0.58
CPSF4-201ENST00000292476 CCT6AP40227 531 aaKnown RBP18.66■□□□□ 0.58
CPSF4-201ENST00000292476 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
CPSF4-201ENST00000292476 GRB10Q13322 594 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 TMEM119Q4V9L6 283 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 HSP90AA4PQ58FG1 418 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 RIOX2Q8IUF8 465 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 NSUN6Q8TEA1 469 aaKnown RBP18.66■□□□□ 0.58
CPSF4-201ENST00000292476 LARP4BQ92615 738 aaKnown RBP18.66■□□□□ 0.58
CPSF4-201ENST00000292476 SLC5A5Q92911 643 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 ARID3AQ99856 593 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 C7orf25Q9BPX7 421 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 FAM53CQ9NYF3 392 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 PFASO15067 1338 aa18.66■□□□□ 0.58
CPSF4-201ENST00000292476 BTBD19C9JJ37 291 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 MAFGO15525 162 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 SLC25A27O95847 323 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 MUTP22033 750 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 CASQ1P31415 396 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 PPP1R2P41236 205 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 CBX1P83916 185 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 GOLGA8FQ08AF8 430 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 GOLGA8DPQ0D2H9 430 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 BAATQ14032 418 aaPredicted RBP18.65■□□□□ 0.58
CPSF4-201ENST00000292476 LRCH2Q5VUJ6 765 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 FBXO38Q6PIJ6 1188 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 MNS1Q8NEH6 495 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 MTRQ99707 1265 aa18.65■□□□□ 0.58
CPSF4-201ENST00000292476 ZNF577Q9BSK1 485 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms