RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PCDHA12Q9UN75 941 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 KIAA1024Q9UPX6 916 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 PCDHA2Q9Y5H9 948 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 KIF13BQ9NQT8 1826 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 RAD51CO43502 376 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 GNA14O95837 355 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 AKR1B1P15121 316 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 EPS15P42566 896 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 HERC4Q5GLZ8 1057 aaPredicted RBP14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 GPBP1Q86WP2 473 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 CCDC65Q8IXS2 484 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 ADGRF4Q8IZF3 695 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 MREGQ8N565 214 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 GANQ9H2C0 597 aa14.55□□□□□ -0.08
SLC28A1-201ENST00000286749 UFL1O94874 794 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 PLA2G4BP0C869 781 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 GUCY1A3Q02108 690 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 SF3B2Q13435 895 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 CDC37Q16543 378 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 MFSD14BQ5SR56 506 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 RC3H1Q5TC82 1133 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 TTBK2Q6IQ55 1244 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 DPP8Q6V1X1 898 aaPredicted RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 KDM7AQ6ZMT4 941 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 USP38Q8NB14 1042 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 SCFD1Q8WVM8 642 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 ARHGEF1Q92888 912 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 KCTD10Q9H3F6 313 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 AIPL1Q9NZN9 384 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 PNMA6FA0A0J9YX94 578 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 POTEB3A0JP26 581 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 POTECB2RU33 542 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 ACTN1P12814 892 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 CLK2P49760 499 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 MARSP56192 900 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 TNNC1P63316 161 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 ADAM9Q13443 819 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 PICALMQ13492 652 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 POTEBQ6S5H4 581 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 KAT2BQ92831 832 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 CUL5Q93034 780 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 NT5C3AQ9H0P0 336 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 GOLPH3Q9H4A6 298 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 ZHX3Q9H4I2 956 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 RTCBQ9Y3I0 505 aaKnown RBP14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 KDM3AQ9Y4C1 1321 aa14.54□□□□□ -0.08
SLC28A1-201ENST00000286749 PLIN4Q96Q06 1357 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 A6NNZ2 444 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 KCNK3O14649 394 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 SNHG28P0DPA3 235 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 NR1D1P20393 614 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 SLC16A2P36021 539 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 KCNH2Q12809 1159 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 PTPROQ16827 1216 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 FAM98CQ17RN3 349 aaKnown RBP14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 TUBB8Q3ZCM7 444 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 PPP1R18Q6NYC8 613 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 WHAMMQ8TF30 809 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 TAF4BQ92750 862 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 EMILIN3Q9NT22 766 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 INPP5BP32019 993 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 PTK2Q05397 1052 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 ZNF543Q08ER8 600 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 HYIQ5T013 277 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 C15orf52Q6ZUT6 534 aaKnown RBP14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 DNAAF5Q86Y56 855 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 CD302Q8IX05 232 aa14.53□□□□□ -0.08
SLC28A1-201ENST00000286749 KRT18P05783 430 aaKnown RBP14.52□□□□□ -0.08
SLC28A1-201ENST00000286749 LSP1P33241 339 aa14.52□□□□□ -0.08
SLC28A1-201ENST00000286749 RPS6KA1Q15418 735 aa14.52□□□□□ -0.08
SLC28A1-201ENST00000286749 MAATS1Q7Z4T9 603 aa14.52□□□□□ -0.08
SLC28A1-201ENST00000286749 PLAAQ9Y263 795 aa14.52□□□□□ -0.08
SLC28A1-201ENST00000286749 MYBP10242 640 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 IL1R1P14778 569 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 CYP11B2P19099 503 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 GTF2A1P52655 376 aaPredicted RBP14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 MRPL12P52815 198 aaKnown RBP14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 ERVK-9P63128 1117 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 HLTFQ14527 1009 aaKnown RBP eCLIP14.52□□□□□ -0.098e-6■■■■□ 21.3
SLC28A1-201ENST00000286749 ZNF571Q7Z3V5 609 aaPredicted RBP14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 ATP6V1G3Q96LB4 118 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 TMEM59LQ9UK28 342 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 HDAC9Q9UKV0 1011 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 GAKO14976 1311 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 BTAF1O14981 1849 aa14.52□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L10C9JJH3 530 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 CETN3O15182 167 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 CLSTN1O94985 981 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 KIF4AO95239 1232 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 GCFC2P16383 781 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 SLC9A1P19634 815 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 NR2F2P24468 414 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 STAT3P40763 770 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 CASP5P51878 434 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 CEP85LQ5SZL2 805 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 B4GALNT4Q76KP1 1039 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 PLCD3Q8N3E9 789 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 IPO4Q8TEX9 1081 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 TAF1DQ9H5J8 278 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 PSTPIP2Q9H939 334 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms