RNA–Protein interactions for RNA: ENST00000283233.9

CCDC148-201, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 3,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-201ENST00000283233 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 FSD1Q9BTV5 496 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 TMBIM4Q9HC24 238 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 ZNF180Q9UJW8 692 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 INTUQ9ULD6 942 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 TRIM43BA6NCK2 446 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 F8VZ95 297 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 USO1O60763 962 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 HEXIM1O94992 359 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 ATP6V1C1P21283 382 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 PSMC4P43686 418 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 IFI16Q16666 785 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 DUS1LQ6P1R4 473 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 CCDC129Q6ZRS4 1044 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 SLC15A3Q8IY34 581 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 MMGT1Q8N4V1 131 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 ZBTB8BQ8NAP8 495 aaPredicted RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 FBF1Q8TES7 1133 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 CHMP6Q96FZ7 201 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 MS4A14Q96JA4 679 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 SRPK1Q96SB4 655 aaKnown RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 OXCT2Q9BYC2 517 aaPredicted RBP13.26□□□□□ -0.29
CCDC148-201ENST00000283233 VCXQ9H320 206 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 LRRC4CQ9HCJ2 640 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 PNMA3Q9UL41 463 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 NCK2O43639 380 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 CEP104O60308 925 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 YEATS4O95619 227 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 RARAP10276 462 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 CASP7P55210 303 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 TMED1Q13445 227 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 SGSM1Q2NKQ1 1148 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 MAP7D1Q3KQU3 841 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 RUFY4Q6ZNE9 571 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 CLMNQ96JQ2 1002 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 GBP5Q96PP8 586 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 IWS1Q96ST2 819 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 HAUS4Q9H6D7 363 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 ZNF711Q9Y462 761 aa13.26□□□□□ -0.29
CCDC148-201ENST00000283233 SMIM23A6NLE4 172 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 MAGEB3O15480 346 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 XBP1P17861 261 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 PPP2R2AP63151 447 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 TRIM28Q13263 835 aaKnown RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 SMYD1Q8NB12 490 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 ENOX1Q8TC92 643 aaKnown RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 NEUROD6Q96NK8 337 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 GPHNQ9NQX3 736 aaPredicted RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 ARHGEF38Q9NXL2 777 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 ADD3Q9UEY8 706 aaKnown RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 SCOCQ9UIL1 159 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 VCAM1P19320 739 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 CASP1P29466 404 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 HLTFQ14527 1009 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 ZNF365Q70YC5 407 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 GPR101Q96P66 508 aaPredicted RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 XPO6Q96QU8 1125 aaKnown RBP13.25□□□□□ -0.29
CCDC148-201ENST00000283233 POLR3EQ9NVU0 708 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 SWAP70Q9UH65 585 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 TMCO1Q9UM00 188 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 NUP98P52948 1817 aa13.25□□□□□ -0.29
CCDC148-201ENST00000283233 COL5A3P25940 1745 aaPredicted RBP13.24□□□□□ -0.29
CCDC148-201ENST00000283233 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 FDPSP14324 419 aaKnown RBP13.24□□□□□ -0.29
CCDC148-201ENST00000283233 IFNAR2P48551 515 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 RCN2Q14257 317 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 C2CD5Q86YS7 1000 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 IFT43Q96FT9 208 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 INIPQ9NRY2 104 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 BOLA2-SMG1P6H3BVE0 249 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 SOCS7O14512 581 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 ORC4O43929 436 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 KCNA3P22001 575 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 CACNA2D1P54289 1103 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 MUM1Q2TAK8 710 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 CCDC152Q4G0S7 254 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 SMUG1Q53HV7 270 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 LRRC34Q8IZ02 419 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 CACNA1FO60840 1977 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 LDHAP00338 332 aaKnown RBP13.24□□□□□ -0.29
CCDC148-201ENST00000283233 GSTA1P08263 222 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 TRIML1Q8N9V2 468 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 HIC2Q96JB3 615 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 AGAP3Q96P47 875 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 KCNH3Q9ULD8 1083 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 IQSEC3Q9UPP2 1182 aaPredicted RBP13.24□□□□□ -0.29
CCDC148-201ENST00000283233 WDR37Q9Y2I8 494 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 LRRC42Q9Y546 428 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
CCDC148-201ENST00000283233 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.24□□□□□ -0.29
CCDC148-201ENST00000283233 ITIH6Q6UXX5 1313 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms