RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 SLC39A2Q9NP94 309 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 RBPJLQ9UBG7 517 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 RABGAP1Q9Y3P9 1069 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 ZNF76P36508 570 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 SPAG1Q07617 926 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 COBLL1Q53SF7 1204 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 SLC30A10Q6XR72 485 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 CHST13Q8NET6 341 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 PTPN18Q99952 460 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 VPS16Q9H269 839 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 KCND1Q9NSA2 647 aa23.36■■□□□ 1.33
YBX3-202ENST00000279550 TRMT1Q9NXH9 659 aaKnown RBP23.36■■□□□ 1.33
YBX3-202ENST00000279550 TESPA1A2RU30 521 aaPredicted RBP23.35■■□□□ 1.33
YBX3-202ENST00000279550 TMEM88BA6NKF7 163 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 SLC26A4O43511 780 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 EHHADHQ08426 723 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 FILIP1LQ4L180 1135 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 ANKRD40Q6AI12 368 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 SMCR8Q8TEV9 937 aaPredicted RBP23.35■■□□□ 1.33
YBX3-202ENST00000279550 GTF3C2Q8WUA4 911 aaPredicted RBP23.35■■□□□ 1.33
YBX3-202ENST00000279550 SRRTQ9BXP5 876 aaKnown RBP23.35■■□□□ 1.33
YBX3-202ENST00000279550 NT5C3AQ9H0P0 336 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 THAP9Q9H5L6 903 aa23.35■■□□□ 1.33
YBX3-202ENST00000279550 ABT1Q9ULW3 272 aaKnown RBP23.35■■□□□ 1.33
YBX3-202ENST00000279550 POTEFA5A3E0 1075 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 SSBP05455 408 aaKnown RBP eCLIP23.34■■□□□ 1.33
YBX3-202ENST00000279550 SLC10A3P09131 477 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 PLA2G4BP0C869 781 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 YY1P25490 414 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 ADKP55263 362 aaKnown RBP23.34■■□□□ 1.33
YBX3-202ENST00000279550 BAATQ14032 418 aaPredicted RBP23.34■■□□□ 1.33
YBX3-202ENST00000279550 POTEGQ6S5H5 508 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 ZFP91Q96JP5 570 aaPredicted RBP23.34■■□□□ 1.33
YBX3-202ENST00000279550 MAF1Q9H063 256 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 SEMA6BQ9H3T3 888 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 RPTORQ8N122 1335 aa23.34■■□□□ 1.33
YBX3-202ENST00000279550 SPATA31C1P0DKV0 1188 aa23.33■■□□□ 1.33
YBX3-202ENST00000279550 IDEP14735 1019 aa23.33■■□□□ 1.33
YBX3-202ENST00000279550 FSTL1Q12841 308 aa23.33■■□□□ 1.33
YBX3-202ENST00000279550 CEP135Q66GS9 1140 aa23.33■■□□□ 1.33
YBX3-202ENST00000279550 MOV10L1Q9BXT6 1211 aaKnown RBP23.33■■□□□ 1.33
YBX3-202ENST00000279550 GTPBP4Q9BZE4 634 aaKnown RBP23.33■■□□□ 1.33
YBX3-202ENST00000279550 LRRC27Q9C0I9 530 aa23.33■■□□□ 1.33
YBX3-202ENST00000279550 A1CFQ9NQ94 594 aaKnown RBP23.33■■□□□ 1.33
YBX3-202ENST00000279550 FBXO40Q9UH90 709 aa23.33■■□□□ 1.33
YBX3-202ENST00000279550 NPHP3-ACAD11A0A0J9YXS1 232 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 MANSC4A6NHS7 340 aaPredicted RBP23.33■■□□□ 1.32
YBX3-202ENST00000279550 N4BP3O15049 544 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 KCNJ6P48051 423 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 TERF1P54274 439 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 CATSPER3Q86XQ3 398 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 CREBRFQ8IUR6 639 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 ZNF784Q8NCA9 323 aaPredicted RBP23.33■■□□□ 1.32
YBX3-202ENST00000279550 GLIS3Q8NEA6 775 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 CCDC112Q8NEF3 446 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 CYP39A1Q9NYL5 469 aa23.33■■□□□ 1.32
YBX3-202ENST00000279550 EML1O00423 815 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 SLC25A27O95847 323 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 PSMC6P62333 389 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 COASYQ13057 564 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 GPBP1Q86WP2 473 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 NCAPG2Q86XI2 1143 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 HHIPL1Q96JK4 782 aa23.32■■□□□ 1.32
YBX3-202ENST00000279550 FRMPD4Q14CM0 1322 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 FAM155AB1AL88 458 aaPredicted RBP23.31■■□□□ 1.32
YBX3-202ENST00000279550 MEIS1O00470 390 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 ERVK-9P63128 1117 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 ERVK-24P63145 666 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 RBL2Q08999 1139 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 Q3C1V9 767 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 NYAP1Q6ZVC0 841 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 CSGALNACT2Q8N6G5 542 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 NOC3LQ8WTT2 800 aaKnown RBP23.31■■□□□ 1.32
YBX3-202ENST00000279550 CCDC102AQ96A19 550 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 TAAR1Q96RJ0 339 aa23.31■■□□□ 1.32
YBX3-202ENST00000279550 PARK7Q99497 189 aaKnown RBP23.31■■□□□ 1.32
YBX3-202ENST00000279550 BICDL2A1A5D9 508 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 TNNT1P13805 278 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 CYP11B2P19099 503 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 ERCC3P19447 782 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 COPB2P35606 906 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 PPP1R2P41236 205 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 LRRC41Q15345 812 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 HAUS3Q68CZ6 603 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 CENPPQ6IPU0 288 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 ANKRD20A12PQ8NF67 263 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 ERMNQ8TAM6 284 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 SLC5A5Q92911 643 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 EEF2KMTQ96G04 330 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 RMDN3Q96TC7 470 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 ITIH6Q6UXX5 1313 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 NRDCO43847 1150 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 EEF1GP26641 437 aaKnown RBP23.3■■□□□ 1.32
YBX3-202ENST00000279550 RPA1P27694 616 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 GCLCP48506 637 aaPredicted RBP23.3■■□□□ 1.32
YBX3-202ENST00000279550 SLC12A3P55017 1021 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 ARSHQ5FYA8 562 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 ANKRD35Q8N283 1001 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 PPP1R13BQ96KQ4 1090 aa23.3■■□□□ 1.32
YBX3-202ENST00000279550 PURBQ96QR8 312 aaKnown RBP23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms