RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 C15orf41Q9Y2V0 281 aa8.36□□□□□ -1.07
TRIM6-201ENST00000278302 CAPN6Q9Y6Q1 641 aa8.36□□□□□ -1.07
TRIM6-201ENST00000278302 ROBO3Q96MS0 1386 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 C6orf229H3BNL8 230 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 NCK2O43639 380 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 DIAPH2O60879 1101 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 SMNDC1O75940 238 aaKnown RBP eCLIP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MYL1P05976 194 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PLCG1P19174 1290 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PRPHP41219 470 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 ASIC1P78348 528 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PDE4DQ08499 809 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 BYSLQ13895 437 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MFSD14BQ5SR56 506 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 IQCEQ6IPM2 695 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 C16orf86Q6ZW13 317 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 KRT26Q7Z3Y9 468 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 TBC1D1Q86TI0 1168 aaPredicted RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MB21D1Q8N884 522 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 NEDD1Q8NHV4 660 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PIK3R5Q8WYR1 880 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 RBM17Q96I25 401 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MS4A14Q96JA4 679 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PIGSQ96S52 555 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 SPZ1Q9BXG8 430 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 ZMYND12Q9H0C1 365 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 LUC7L2Q9Y383 392 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MAST2Q6P0Q8 1798 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 GPR75-ASB3A0A0A6YYF3 556 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 IPO7O95373 1038 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 VAV2P52735 878 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PMS1P54277 932 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 AMPD3Q01432 767 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 TXNRD1Q16881 649 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PRR5LQ6MZQ0 368 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 NEK8Q86SG6 692 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 CACNA2D3Q8IZS8 1091 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MMGT1Q8N4V1 131 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 CSGALNACT2Q8N6G5 542 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 CEP95Q96GE4 821 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 CALML4Q96GE6 196 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 AK8Q96MA6 479 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 THAP9Q9H5L6 903 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 MLXIPQ9HAP2 919 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 EPB41L5Q9HCM4 733 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 RBM12Q9NTZ6 932 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 KBTBD4Q9NVX7 518 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 ZNF831Q5JPB2 1677 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 KLRC4O43908 158 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 RHOBTB3O94955 611 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 EEF1GP26641 437 aaKnown RBP8.35□□□□□ -1.07
TRIM6-201ENST00000278302 TXKP42681 527 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 GUCY2DQ02846 1103 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 TRAF1Q13077 416 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 PICALMQ13492 652 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 TBC1D25Q3MII6 688 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 TBCKQ8TEA7 893 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 AGAP11Q8TF27 550 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 CUEDC2Q9H467 287 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 EBF2Q9HAK2 575 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 SNX12Q9UMY4 172 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 RPS6KL1Q9Y6S9 549 aa8.35□□□□□ -1.07
TRIM6-201ENST00000278302 FLT1P17948 1338 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 FRMPD2Q68DX3 1309 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 USP17L5A8MUK1 530 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 MTIF2P46199 727 aaKnown RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 RNASE9P60153 205 aaKnown RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 IFFO1Q0D2I5 559 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 ODF2Q5BJF6 829 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 IRF2BP1Q8IU81 584 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 GIMAP8Q8ND71 665 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 CAVIN3Q969G5 261 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 DHTKD1Q96HY7 919 aaPredicted RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 BATF3Q9NR55 127 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 AGPAT5Q9NUQ2 364 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 PANK4Q9NVE7 773 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 LRWD1Q9UFC0 647 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 PLAAQ9Y263 795 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 BICDL2A1A5D9 508 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 LGALS16A8MUM7 142 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 B4DLN1 442 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 MOCS3O95396 460 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 SERPINB2P05120 415 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 LINGO3P0C6S8 592 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 DNM2P50570 870 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 CCDC96Q2M329 555 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 CPLX4Q7Z7G2 160 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 REXO1Q8N1G1 1221 aaKnown RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 ANKRD13CQ8N6S4 541 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 CDK5RAP3Q96JB5 506 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 TUBGCP2Q9BSJ2 902 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 MAGEF1Q9HAY2 307 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 ZNHIT6Q9NWK9 470 aaKnown RBP8.34□□□□□ -1.07
TRIM6-201ENST00000278302 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
TRIM6-201ENST00000278302 F8W031 263 aaPredicted RBP8.33□□□□□ -1.08
TRIM6-201ENST00000278302 RIMBP2O15034 1052 aa8.33□□□□□ -1.08
TRIM6-201ENST00000278302 LGR5O75473 907 aa8.33□□□□□ -1.08
TRIM6-201ENST00000278302 TRIM21P19474 475 aaKnown RBP8.33□□□□□ -1.08
TRIM6-201ENST00000278302 KLK7P49862 253 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms