RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 MOGSQ13724 837 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 CENPPQ6IPU0 288 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 CCDC65Q8IXS2 484 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 NSUN6Q8TEA1 469 aaKnown RBP24.58■■□□□ 1.52
CCDC7-201ENST00000277657 OPTNQ96CV9 577 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 THAP9Q9H5L6 903 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 RTN4Q9NQC3 1192 aaKnown RBP24.58■■□□□ 1.52
CCDC7-201ENST00000277657 BTBD7Q9P203 1132 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 PYCARDQ9ULZ3 195 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 AGTPBP1Q9UPW5 1226 aa24.58■■□□□ 1.52
CCDC7-201ENST00000277657 MYCLP12524 364 aaPredicted RBP24.57■■□□□ 1.52
CCDC7-201ENST00000277657 CCND2P30279 289 aa24.57■■□□□ 1.52
CCDC7-201ENST00000277657 CTTNQ14247 550 aaKnown RBP24.57■■□□□ 1.52
CCDC7-201ENST00000277657 TCP11X2Q5H9J9 407 aa24.57■■□□□ 1.52
CCDC7-201ENST00000277657 KIAA1524Q8TCG1 905 aa24.57■■□□□ 1.52
CCDC7-201ENST00000277657 NOC3LQ8WTT2 800 aaKnown RBP24.57■■□□□ 1.52
CCDC7-201ENST00000277657 TRIM47Q96LD4 638 aa24.57■■□□□ 1.52
CCDC7-201ENST00000277657 TBC1D22BQ9NU19 505 aa24.57■■□□□ 1.52
CCDC7-201ENST00000277657 PCDHA2Q9Y5H9 948 aa24.57■■□□□ 1.52
CCDC7-201ENST00000277657 NPHP3-ACAD11A0A0J9YXS1 232 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 NR3C2P08235 984 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 POTEJP0CG39 1038 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 KRT31Q15323 416 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 RIOX2Q8IUF8 465 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 TPH2Q8IWU9 490 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 NEK9Q8TD19 979 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 LCTP09848 1927 aa24.56■■□□□ 1.52
CCDC7-201ENST00000277657 KCNJ18B7U540 433 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 GIT2Q14161 759 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 KCNJ12Q14500 433 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 FAM26FQ5R3K3 315 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 ANKRD40Q6AI12 368 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 CCDC150Q8NCX0 1101 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 ASCC2Q9H1I8 757 aaPredicted RBP24.55■■□□□ 1.52
CCDC7-201ENST00000277657 BHMT2Q9H2M3 363 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 SEMA6BQ9H3T3 888 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 UNCXA6NJT0 531 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 IRX3P78415 501 aaPredicted RBP24.55■■□□□ 1.52
CCDC7-201ENST00000277657 ARMCX5Q6P1M9 558 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 FOXR2Q6PJQ5 311 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 INPP4AQ96PE3 977 aaPredicted RBP24.55■■□□□ 1.52
CCDC7-201ENST00000277657 CLEC11AQ9Y240 323 aa24.55■■□□□ 1.52
CCDC7-201ENST00000277657 TBX2Q13207 712 aaPredicted RBP24.54■■□□□ 1.52
CCDC7-201ENST00000277657 GPRASP2Q96D09 838 aa24.54■■□□□ 1.52
CCDC7-201ENST00000277657 NACC1Q96RE7 527 aa24.54■■□□□ 1.52
CCDC7-201ENST00000277657 SRRTQ9BXP5 876 aaKnown RBP24.54■■□□□ 1.52
CCDC7-201ENST00000277657 PKD2L1Q9P0L9 805 aa24.54■■□□□ 1.52
CCDC7-201ENST00000277657 WRAP73Q9P2S5 460 aaPredicted RBP24.54■■□□□ 1.52
CCDC7-201ENST00000277657 FBXO40Q9UH90 709 aa24.54■■□□□ 1.52
CCDC7-201ENST00000277657 MAFGO15525 162 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 KRT18P05783 430 aaKnown RBP24.53■■□□□ 1.52
CCDC7-201ENST00000277657 EEF1GP26641 437 aaKnown RBP24.53■■□□□ 1.52
CCDC7-201ENST00000277657 PBX1P40424 430 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 HERVK_113P62684 666 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 FILIP1LQ4L180 1135 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 SPECC1LQ69YQ0 1117 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 FASTKD5Q7L8L6 764 aaKnown RBP24.53■■□□□ 1.52
CCDC7-201ENST00000277657 MIER3Q7Z3K6 550 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 CSGALNACT2Q8N6G5 542 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 ANKRD20A12PQ8NF67 263 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 REEP2Q9BRK0 252 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 SPATC1LQ9H0A9 340 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 DDX39AO00148 427 aaKnown RBP24.53■■□□□ 1.52
CCDC7-201ENST00000277657 TEX33O43247 280 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 GJA5P36382 358 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 CACNB1Q02641 598 aaPredicted RBP24.53■■□□□ 1.52
CCDC7-201ENST00000277657 MAP1SQ66K74 1059 aaPredicted RBP24.53■■□□□ 1.52
CCDC7-201ENST00000277657 GLIS3Q8NEA6 775 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 PIGOQ8TEQ8 1089 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 LXNQ9BS40 222 aa24.53■■□□□ 1.52
CCDC7-201ENST00000277657 LOXHD1Q8IVV2 1947 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 TESPA1A2RU30 521 aaPredicted RBP24.52■■□□□ 1.52
CCDC7-201ENST00000277657 STAM2O75886 525 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 COPB1P53618 953 aaKnown RBP24.52■■□□□ 1.52
CCDC7-201ENST00000277657 CCZ1BP86790 482 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 CCZ1P86791 482 aaPredicted RBP24.52■■□□□ 1.52
CCDC7-201ENST00000277657 PTPN21Q16825 1174 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 HERC4Q5GLZ8 1057 aaPredicted RBP24.52■■□□□ 1.52
CCDC7-201ENST00000277657 RINT1Q6NUQ1 792 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 MYOCDQ8IZQ8 938 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 RUSC1Q9BVN2 902 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 PFASO15067 1338 aa24.52■■□□□ 1.52
CCDC7-201ENST00000277657 TRAF5O00463 557 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 PEX10O60683 326 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 ATP9AO75110 1047 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 CNMDO75829 334 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 P4HBP07237 508 aaKnown RBP24.51■■□□□ 1.51
CCDC7-201ENST00000277657 LRRC63Q05C16 580 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 RAD51AP2Q09MP3 1159 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 GPAT2Q6NUI2 795 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 DNERQ8NFT8 737 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 RGS20O76081 388 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 SFPQP23246 707 aaKnown RBP eCLIP24.51■■□□□ 1.51
CCDC7-201ENST00000277657 LRRC41Q15345 812 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 NLRX1Q86UT6 975 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 IWS1Q96ST2 819 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 FGFBP2Q9BYJ0 223 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 SPTLC3Q9NUV7 552 aa24.51■■□□□ 1.51
CCDC7-201ENST00000277657 ZBTB39O15060 712 aa24.5■■□□□ 1.51
CCDC7-201ENST00000277657 C1orf186Q6ZWK4 172 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms