RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 NR3C2P08235 984 aa27.77■■■□□ 2.04
SSBP4-201ENST00000270061 TXNP10599 105 aaKnown RBP27.77■■■□□ 2.04
SSBP4-201ENST00000270061 MDM2Q00987 491 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-201ENST00000270061 CXCL17Q6UXB2 119 aa27.77■■■□□ 2.04
SSBP4-201ENST00000270061 LBHD1Q9BQE6 289 aaPredicted RBP27.77■■■□□ 2.04
SSBP4-201ENST00000270061 PDLIM7Q9NR12 457 aa27.77■■■□□ 2.04
SSBP4-201ENST00000270061 SEPT14Q6ZU15 432 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 OR6J1Q8NGC5 347 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 RIC8AQ9NPQ8 531 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 MROH7Q68CQ1 1323 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 A0A0U1RQG5 324 aaPredicted RBP27.76■■■□□ 2.03
SSBP4-201ENST00000270061 CABYRO75952 493 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 SYKP43405 635 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 ADCY7P51828 1080 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 ANKRD33Q7Z3H0 272 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 REXO1Q8N1G1 1221 aaKnown RBP27.76■■■□□ 2.03
SSBP4-201ENST00000270061 TOX2Q96NM4 488 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 GLT8D2Q9H1C3 349 aa27.76■■■□□ 2.03
SSBP4-201ENST00000270061 LAMA2P24043 3122 aaKnown RBP27.75■■■□□ 2.03
SSBP4-201ENST00000270061 EIF3JO75822 258 aaKnown RBP27.75■■■□□ 2.03
SSBP4-201ENST00000270061 CLTBP09497 229 aa27.75■■■□□ 2.03
SSBP4-201ENST00000270061 CPT1AP50416 773 aa27.75■■■□□ 2.03
SSBP4-201ENST00000270061 PTGDRQ13258 359 aa27.75■■■□□ 2.03
SSBP4-201ENST00000270061 FCHSD1Q86WN1 690 aa27.75■■■□□ 2.03
SSBP4-201ENST00000270061 CKAP2LQ8IYA6 745 aa27.75■■■□□ 2.03
SSBP4-201ENST00000270061 PDCD2LQ9BRP1 358 aa27.75■■■□□ 2.03
SSBP4-201ENST00000270061 UBE2OQ9C0C9 1292 aaKnown RBP27.75■■■□□ 2.03
SSBP4-201ENST00000270061 DCDC2CA8MYV0 355 aa27.74■■■□□ 2.03
SSBP4-201ENST00000270061 NONOQ15233 471 aaKnown RBP eCLIP27.74■■■□□ 2.031e-6■■■■□ 20.3
SSBP4-201ENST00000270061 ARL6IP4Q66PJ3 421 aaKnown RBP27.74■■■□□ 2.03
SSBP4-201ENST00000270061 FAM13BQ9NYF5 915 aa27.74■■■□□ 2.03
SSBP4-201ENST00000270061 ARVCFO00192 962 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 ARIH2O95376 493 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 GRIN1Q05586 938 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 BRDTQ58F21 947 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-201ENST00000270061 SH3RF1Q7Z6J0 888 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 C4orf32Q8N8J7 132 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 COPS5Q92905 334 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 KCNH3Q9ULD8 1083 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 MYCLP12524 364 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-201ENST00000270061 CDK7P50613 346 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 FXR1P51114 621 aaKnown RBP eCLIP27.73■■■□□ 2.03
SSBP4-201ENST00000270061 PGM5Q15124 567 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 INF2Q27J81 1249 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 CCDC62Q6P9F0 684 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 ELOA2Q8IYF1 753 aaPredicted RBP27.73■■■□□ 2.03
SSBP4-201ENST00000270061 SDF4Q9BRK5 362 aa27.73■■■□□ 2.03
SSBP4-201ENST00000270061 TRIM43BA6NCK2 446 aa27.72■■■□□ 2.03
SSBP4-201ENST00000270061 MCM7P33993 719 aa27.72■■■□□ 2.03
SSBP4-201ENST00000270061 TYRO3Q06418 890 aa27.72■■■□□ 2.03
SSBP4-201ENST00000270061 ORC2Q13416 577 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-201ENST00000270061 CUL5Q93034 780 aa27.72■■■□□ 2.03
SSBP4-201ENST00000270061 TRIM43Q96BQ3 446 aaPredicted RBP27.72■■■□□ 2.03
SSBP4-201ENST00000270061 CSRNP2Q9H175 543 aa27.72■■■□□ 2.03
SSBP4-201ENST00000270061 MRVI1Q9Y6F6 885 aa27.72■■■□□ 2.03
SSBP4-201ENST00000270061 CLK2P49760 499 aaKnown RBP27.71■■■□□ 2.03
SSBP4-201ENST00000270061 FAAP100Q0VG06 881 aa27.71■■■□□ 2.03
SSBP4-201ENST00000270061 SASS6Q6UVJ0 657 aa27.71■■■□□ 2.03
SSBP4-201ENST00000270061 TMEM39AQ9NV64 488 aa27.71■■■□□ 2.03
SSBP4-201ENST00000270061 LAD1O00515 517 aa27.71■■■□□ 2.03
SSBP4-201ENST00000270061 LY6KQ17RY6 165 aa27.71■■■□□ 2.03
SSBP4-201ENST00000270061 VSIG10LQ86VR7 867 aa27.71■■■□□ 2.03
SSBP4-201ENST00000270061 SCN10AQ9Y5Y9 1956 aa27.7■■■□□ 2.03
SSBP4-201ENST00000270061 CCND2P30279 289 aa27.7■■■□□ 2.02
SSBP4-201ENST00000270061 ITGA7Q13683 1181 aa27.7■■■□□ 2.02
SSBP4-201ENST00000270061 UVSSAQ2YD98 709 aa27.7■■■□□ 2.02
SSBP4-201ENST00000270061 NEK8Q86SG6 692 aa27.7■■■□□ 2.02
SSBP4-201ENST00000270061 IL31RAQ8NI17 732 aa27.7■■■□□ 2.02
SSBP4-201ENST00000270061 PANK2Q9BZ23 570 aa27.7■■■□□ 2.02
SSBP4-201ENST00000270061 A6NJR5 290 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 PIK3CDO00329 1044 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 KIAA0355O15063 1070 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 MYL3P08590 195 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 USP17L6PQ6QN14 398 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 TDHQ8IZJ6 230 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 PSTPIP2Q9H939 334 aa27.69■■■□□ 2.02
SSBP4-201ENST00000270061 GH1P01241 217 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 PURAQ00577 322 aaKnown RBP27.68■■■□□ 2.02
SSBP4-201ENST00000270061 JAKMIP3Q5VZ66 844 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 TEX2Q8IWB9 1127 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 SLC43A3Q8NBI5 491 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 BADQ92934 168 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 SEZ6LQ9BYH1 1024 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 DDX41Q9UJV9 622 aaKnown RBP27.68■■■□□ 2.02
SSBP4-201ENST00000270061 MEIS2O14770 477 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 TLR3O15455 904 aaKnown RBP27.68■■■□□ 2.02
SSBP4-201ENST00000270061 CAVIN2O95810 425 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 RAG1P15918 1043 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 SPECC1Q5M775 1068 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 FAM126BQ8IXS8 530 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 TBCKQ8TEA7 893 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 FRMPD4Q14CM0 1322 aa27.68■■■□□ 2.02
SSBP4-201ENST00000270061 RGS20O76081 388 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 PRPHP41219 470 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 PSMC6P62333 389 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 KCNV1Q6PIU1 500 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 RNF214Q8ND24 703 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 MTG1Q9BT17 334 aaPredicted RBP27.67■■■□□ 2.02
SSBP4-201ENST00000270061 TMEM260Q9NX78 707 aa27.67■■■□□ 2.02
SSBP4-201ENST00000270061 KIAA1468Q9P260 1216 aa27.67■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms