RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 GRIN1Q05586 938 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 MRPL28Q13084 256 aaKnown RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 USP6NLQ92738 828 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 CEP170P1Q96L14 293 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 LRRC37BQ96QE4 947 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.57□□□□□ -0.24
CDH11-201ENST00000268603 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 RPF1Q9H9Y2 349 aaKnown RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 MT-ND3P03897 115 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 USP14P54578 494 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 MAGOHBQ96A72 148 aaKnown RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 NDFIP2Q9NV92 336 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 ZNF608Q9ULD9 1512 aaPredicted RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 PAPOLAP51003 745 aaKnown RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 TEX2Q8IWB9 1127 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 CCDC90BQ9GZT6 254 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 ORC4O43929 436 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 YY1AP1Q9H869 796 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 FGFR1OP2Q9NVK5 253 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 TBK1Q9UHD2 729 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 ATF5Q9Y2D1 282 aaPredicted RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 USP17L12C9JPN9 530 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 USP17L21D6R901 530 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 RASGRF2O14827 1237 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 IREB2P48200 963 aaKnown RBP13.57□□□□□ -0.24
CDH11-201ENST00000268603 EXOC3L4Q17RC7 722 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 FLAD1Q8NFF5 587 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 ZWILCHQ9H900 591 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 CACNA2D2Q9NY47 1150 aa13.57□□□□□ -0.24
CDH11-201ENST00000268603 NBNO60934 754 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 GJC2Q5T442 439 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 BCAS4Q8TDM0 211 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 MAML1Q92585 1016 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 FBXO2Q9UK22 296 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 CHMLP26374 656 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 SGO2Q562F6 1265 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 E4F1Q66K89 784 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 OTUB1Q96FW1 271 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 LBHD1Q9BQE6 289 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 ANGPT1Q15389 498 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 CENPKQ9BS16 269 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 METTL22Q9BUU2 404 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 NEK8Q86SG6 692 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 CNKSR1Q969H4 720 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 ANGPTL2Q9UKU9 493 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 NSD2O96028 1365 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 LRRN2O75325 713 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 KRT7P08729 469 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 CEP85Q6P2H3 762 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 CCDC197Q8NCU1 140 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 RUNDC3BQ96NL0 473 aa13.56□□□□□ -0.24
CDH11-201ENST00000268603 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
CDH11-201ENST00000268603 GCP02774 474 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 H2AFZP0C0S5 128 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 OR52Z1P0C646 297 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 TRIP13Q15645 432 aaPredicted RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 H2AFVQ71UI9 128 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 C2orf69Q8N8R5 385 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 OR9Q1Q8NGQ5 310 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ZSCAN10Q96SZ4 725 aaPredicted RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 ZNF75DP51815 510 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ADCK2Q7Z695 626 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 SDR42E1Q8WUS8 393 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 SERPINI1Q99574 410 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 KIAA1024Q9UPX6 916 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 MAP3K15Q6ZN16 1313 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 KLRF2D3W0D1 207 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 HSPA1AP0DMV8 641 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 HSPA1BP0DMV9 641 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 KCTD1Q719H9 257 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ARHGAP45Q92619 1136 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 IQCDQ96DY2 449 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ACCSQ96QU6 501 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 GTSE1Q9NYZ3 720 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 IMPACTQ9P2X3 320 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 STRIP2Q9ULQ0 834 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 KCTD17Q8N5Z5 321 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ZNF280CQ8ND82 737 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 KLHL29Q96CT2 875 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 LLPHQ9BRT6 129 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 C19orf44Q9H6X5 657 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 INTS9Q9NV88 658 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 ANKRD36BQ8N2N9 1353 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 SPDYE5A6NIY4 337 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 TRIM37O94972 964 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 IMPDH2P12268 514 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 SPDYE7PQ495Y7 208 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 FAM133BQ5BKY9 247 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 TAS2R42Q7RTR8 314 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 OPTNQ96CV9 577 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 VMP1Q96GC9 406 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 FAM227BQ96M60 508 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 DDX28Q9NUL7 540 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 DTNBO60941 627 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 MYO1DO94832 1006 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 HSPA4LO95757 839 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms