RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 PANK4Q9NVE7 773 aa22.9■■□□□ 1.26
LYSMD2-201ENST00000267838 INTS13Q9NVM9 706 aa22.9■■□□□ 1.26
LYSMD2-201ENST00000267838 PKD2L1Q9P0L9 805 aa22.9■■□□□ 1.26
LYSMD2-201ENST00000267838 MUTP22033 750 aa22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 CCND2P30279 289 aa22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 PMS1P54277 932 aaKnown RBP22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 COASYQ13057 564 aa22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 PABPC4Q13310 644 aaKnown RBP eCLIP22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 CTTNQ14247 550 aaKnown RBP22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 MAP1SQ66K74 1059 aaPredicted RBP22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 BTBD7Q9P203 1132 aa22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 AGTPBP1Q9UPW5 1226 aa22.89■■□□□ 1.26
LYSMD2-201ENST00000267838 RIOK3O14730 519 aaKnown RBP22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 DHX15O43143 795 aaKnown RBP22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 EYA4O95677 639 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 CCNE1P24864 410 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 ARSHQ5FYA8 562 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 APTXQ7Z2E3 356 aaKnown RBP22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 VSIG10LQ86VR7 867 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 VSTM4Q8IW00 320 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 TPH2Q8IWU9 490 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 CCDC65Q8IXS2 484 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 NSUN6Q8TEA1 469 aaKnown RBP22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 P2RX5Q93086 422 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 CTAGE1Q96RT6 745 aa22.89■■□□□ 1.25
LYSMD2-201ENST00000267838 NPHP3-ACAD11A0A0J9YXS1 232 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 A0A1B0GTH6 734 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 BICDL2A1A5D9 508 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 DDX39AO00148 427 aaKnown RBP22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 KRT18P05783 430 aaKnown RBP22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 NR3C2P08235 984 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 GSDMDP57764 484 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 LRMPQ12912 555 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 ITGB3BPQ13352 177 aaPredicted RBP22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 TTI2Q6NXR4 508 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 RIOX2Q8IUF8 465 aa22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 CACTINQ8WUQ7 758 aaKnown RBP22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 ASCC2Q9H1I8 757 aaPredicted RBP22.88■■□□□ 1.25
LYSMD2-201ENST00000267838 TRAF5O00463 557 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 CTIFO43310 598 aaKnown RBP22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 SPAG1Q07617 926 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 MOGSQ13724 837 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 SYCP1Q15431 976 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 FASTKD5Q7L8L6 764 aaKnown RBP22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 TRIM47Q96LD4 638 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 TBC1D22BQ9NU19 505 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 PAXBP1Q9Y5B6 917 aa22.87■■□□□ 1.25
LYSMD2-201ENST00000267838 TESPA1A2RU30 521 aaPredicted RBP22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 PEX10O60683 326 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 NR1I3Q14994 352 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 MIER3Q7Z3K6 550 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 LRRC8AQ8IWT6 810 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 ZNF710Q8N1W2 664 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 GUF1Q8N442 669 aaKnown RBP22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 NEK9Q8TD19 979 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 BHMT2Q9H2M3 363 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 ZNF408Q9H9D4 720 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 LIMA1Q9UHB6 759 aaKnown RBP22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 FRMD3A2A2Y4 597 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 HERVK_113P62684 666 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 CACNB1Q02641 598 aaPredicted RBP22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 ARID5BQ14865 1188 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 FAM26FQ5R3K3 315 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 NOC3LQ8WTT2 800 aaKnown RBP22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 SLC10A4Q96EP9 437 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 DUSP9Q99956 384 aaKnown RBP22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 SPATC1LQ9H0A9 340 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 THAP9Q9H5L6 903 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 FBXO40Q9UH90 709 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 LCTP09848 1927 aa22.86■■□□□ 1.25
LYSMD2-201ENST00000267838 UNCXA6NJT0 531 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 KCNJ18B7U540 433 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 GJA5P36382 358 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 RAD51AP2Q09MP3 1159 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 GIT2Q14161 759 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 KCNJ12Q14500 433 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 TCP11X2Q5H9J9 407 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 ANKRD40Q6AI12 368 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 NLRX1Q86UT6 975 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 ANKRD20A12PQ8NF67 263 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 PIGOQ8TEQ8 1089 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 GPRASP2Q96D09 838 aa22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 SRRTQ9BXP5 876 aaKnown RBP22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 ADD3Q9UEY8 706 aaKnown RBP22.85■■□□□ 1.25
LYSMD2-201ENST00000267838 KRT31Q15323 416 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 FILIP1LQ4L180 1135 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 CENPPQ6IPU0 288 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 ANKRD35Q8N283 1001 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 NACC1Q96RE7 527 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 LXNQ9BS40 222 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 PAGR1Q9BTK6 254 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 SEMA6BQ9H3T3 888 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 PFASO15067 1338 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 LRRC10BA6NIK2 292 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 CNMDO75829 334 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 TNNT1P13805 278 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 OSBPP22059 807 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 SNAPC2Q13487 334 aa22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 HERC4Q5GLZ8 1057 aaPredicted RBP22.84■■□□□ 1.25
LYSMD2-201ENST00000267838 GPAT2Q6NUI2 795 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms