RNA–Protein interactions for RNA: ENST00000265245.9

LSG1-201, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSG1, Length 3,572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-201ENST00000265245 POTEFA5A3E0 1075 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 LCA5LO95447 670 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 NDUFB10O96000 172 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 POTEIP0CG38 1075 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 CYP2C19P33261 490 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 CACNB1Q02641 598 aaPredicted RBP11.38□□□□□ -0.59
LSG1-201ENST00000265245 USH1GQ495M9 461 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 POTEGQ6S5H5 508 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 POTEEQ6S8J3 1075 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
LSG1-201ENST00000265245 TARSL2A2RTX5 802 aaKnown RBP11.37□□□□□ -0.59
LSG1-201ENST00000265245 H0YIN7 160 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 CETN3O15182 167 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 MED24O75448 989 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 CASP8Q14790 479 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SYDE2Q5VT97 1194 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SH3BP5LQ7L8J4 393 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 CCDC155Q8N6L0 562 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SCFD1Q8WVM8 642 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 AKT1S1Q96B36 256 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 NLRC4Q9NPP4 1024 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SNX12Q9UMY4 172 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 NPHP3-ACAD11A0A0J9YXS1 232 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 BMP3P12645 472 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 ADAM9Q13443 819 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 RBM26Q5T8P6 1007 aaKnown RBP11.37□□□□□ -0.59
LSG1-201ENST00000265245 SFMBT2Q5VUG0 894 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 TRIM59Q8IWR1 403 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 ETNPPLQ8TBG4 499 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 FAM20AQ96MK3 541 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SUGCTQ9HAC7 445 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 PCDHA2Q9Y5H9 948 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SLC12A3P55017 1021 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 MARSP56192 900 aaKnown RBP11.37□□□□□ -0.59
LSG1-201ENST00000265245 EDRF1Q3B7T1 1238 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 Q4G0T1 1027 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 FAM83BQ5T0W9 1011 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 CATSPER3Q86XQ3 398 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SIAH1Q8IUQ4 282 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 SYN2Q92777 582 aaPredicted RBP11.37□□□□□ -0.59
LSG1-201ENST00000265245 DRC1Q96MC2 740 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 CAMKK2Q96RR4 588 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 LSM14BQ9BX40 385 aaKnown RBP11.37□□□□□ -0.59
LSG1-201ENST00000265245 FGFBP2Q9BYJ0 223 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 RSPH14Q9UHP6 348 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 ZBTB12Q9Y330 459 aaPredicted RBP11.37□□□□□ -0.59
LSG1-201ENST00000265245 CAPN6Q9Y6Q1 641 aa11.37□□□□□ -0.59
LSG1-201ENST00000265245 FRMD3A2A2Y4 597 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 RPA1P27694 616 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 SREBF1P36956 1147 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 SNAP25P60880 206 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 POLR2FP61218 127 aaKnown RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 KCNMA1Q12791 1236 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 GPIHBP1Q8IV16 184 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 CRYGNQ8WXF5 182 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 MLXIPQ9HAP2 919 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 ZNF219Q9P2Y4 722 aaPredicted RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 ANKRD31Q8N7Z5 1873 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 H3BQF6 201 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 ZNF185O15231 689 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 MOCS3O95396 460 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 GH2P01242 217 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 SERPING1P05155 500 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 TCP1P17987 556 aaKnown RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 ZNF76P36508 570 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 PABPC4Q13310 644 aaKnown RBP eCLIP11.36□□□□□ -0.596e-7■■■■□ 25.6
LSG1-201ENST00000265245 NOX5Q96PH1 765 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 CRACR2AQ9BSW2 395 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 KCTD10Q9H3F6 313 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 ENTPD3O75355 529 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 PRLRP16471 622 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 NR2F2P24468 414 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 NAP1L1P55209 391 aaKnown RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 GFPT1Q06210 699 aaPredicted RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 SPIRE1Q08AE8 756 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 TRAF1Q13077 416 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 TAF3Q5VWG9 929 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 CCDC102AQ96A19 550 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 TDRD3Q9H7E2 651 aaKnown RBP11.36□□□□□ -0.59
LSG1-201ENST00000265245 HYOU1Q9Y4L1 999 aa11.36□□□□□ -0.59
LSG1-201ENST00000265245 APBA3O96018 575 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 DNAJC21Q5F1R6 531 aaKnown RBP11.35□□□□□ -0.59
LSG1-201ENST00000265245 ARSHQ5FYA8 562 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 STYK1Q6J9G0 422 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 GREB1LQ9C091 1923 aaPredicted RBP11.35□□□□□ -0.59
LSG1-201ENST00000265245 FAM86B1E9PN63 330 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 MEIS1O00470 390 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 PJA2O43164 708 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 FAM86B2P0C5J1 330 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 RASSF7Q02833 373 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 ASTE1Q2TB18 679 aaPredicted RBP11.35□□□□□ -0.59
LSG1-201ENST00000265245 CCDC181Q5TID7 509 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 HGSNATQ68CP4 663 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 CC2D2BQ6DHV5 1058 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 CCDC125Q86Z20 511 aa11.35□□□□□ -0.59
LSG1-201ENST00000265245 RNF10Q8N5U6 811 aaKnown RBP11.35□□□□□ -0.59
LSG1-201ENST00000265245 SYT2Q8N9I0 419 aaPredicted RBP11.35□□□□□ -0.59
LSG1-201ENST00000265245 CSRNP1Q96S65 589 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms