RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 ST13P4Q8IZP2 240 aaPredicted RBP12.25□□□□□ -0.45
PTPN4-201ENST00000263708 ZFP42Q96MM3 310 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 MRFAP1Q9Y605 127 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 NBNO60934 754 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 DTNBO60941 627 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 IMPDH2P12268 514 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 ASPSCR1Q9BZE9 553 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 KITP10721 976 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 KRT4P19013 534 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 YTHDC2Q9H6S0 1430 aaKnown RBP12.25□□□□□ -0.45
PTPN4-201ENST00000263708 EFCAB8A8MWE9 144 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 TMEM232C9JQI7 657 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 PJA2O43164 708 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 AFG1LQ8WV93 481 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 MTBPQ96DY7 904 aa12.25□□□□□ -0.45
PTPN4-201ENST00000263708 DNAJC6O75061 913 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 PPP2R5BQ15173 497 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 CASS4Q9NQ75 786 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 WDR17Q8IZU2 1322 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 ECEL1O95672 775 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 DEUP1Q05D60 604 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 DSTYKQ6XUX3 929 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 RRM2BQ7LG56 351 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 SLC17A8Q8NDX2 589 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 DYDC2Q96IM9 177 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 PDE11AQ9HCR9 933 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 SNX5Q9Y5X3 404 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 CENPAP49450 140 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 ADALQ6DHV7 355 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 VCAM1P19320 739 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 ULK4Q96C45 1275 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 METTL22Q9BUU2 404 aaPredicted RBP12.24□□□□□ -0.45
PTPN4-201ENST00000263708 OSBPL10Q9BXB5 764 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 HPS4Q9NQG7 708 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 MYL3P08590 195 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 ABCB5Q2M3G0 1257 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 NEK8Q86SG6 692 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 ZC3H18Q86VM9 953 aaKnown RBP12.24□□□□□ -0.45
PTPN4-201ENST00000263708 PCIF1Q9H4Z3 704 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 GSNP06396 782 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 PLTPP55058 493 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 THEMIS2Q5TEJ8 643 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 EEPD1Q7L9B9 569 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 MYRIPQ8NFW9 859 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 OR6B2Q6IFH4 312 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 CRLF3Q8IUI8 442 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 STXBP2Q15833 593 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 DBNDD2Q9BQY9 259 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 CTTNBP2Q8WZ74 1663 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 H2AFZP0C0S5 128 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 IDI1Q13907 227 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 H2AFVQ71UI9 128 aa12.24□□□□□ -0.45
PTPN4-201ENST00000263708 ZBED1O96006 694 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 ESRRAP11474 423 aaPredicted RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 TADA2BQ86TJ2 420 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 GCNT4Q9P109 453 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 JAK2O60674 1132 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 AFPP02771 609 aaKnown RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 SERPINB2P05120 415 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 ZFXP17010 805 aaPredicted RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 PYGBP11216 843 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 CCDC195A0A1B0GUA6 201 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 SLFN14P0C7P3 912 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 ZAP70P43403 619 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 MCTP2Q6DN12 878 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 F5H423 210 aaPredicted RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 PPP2R2CQ9Y2T4 447 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 NPM3O75607 178 aaKnown RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 KRT7P08729 469 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 HDLBPQ00341 1268 aaKnown RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 DEPDC1Q5TB30 811 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 ARMCX2Q7L311 632 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 SDR42E1Q8WUS8 393 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 TRIM8Q9BZR9 551 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 RGL1Q9NZL6 768 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 SERPIND1P05546 499 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 UBE2TQ9NPD8 197 aaPredicted RBP12.23□□□□□ -0.45
PTPN4-201ENST00000263708 SNX14Q9Y5W7 946 aa12.23□□□□□ -0.45
PTPN4-201ENST00000263708 ZMYND10O75800 440 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 KRT14P02533 472 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 NNMTP40261 264 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 PAPOLAP51003 745 aaKnown RBP12.22□□□□□ -0.45
PTPN4-201ENST00000263708 C2orf54Q08AI8 447 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 TTLL11Q8NHH1 800 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 FAF2Q96CS3 445 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 SEL1LQ9UBV2 794 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 GADD45BO75293 160 aaPredicted RBP12.22□□□□□ -0.45
PTPN4-201ENST00000263708 SPAG7O75391 227 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 TCP1P17987 556 aaKnown RBP12.22□□□□□ -0.45
PTPN4-201ENST00000263708 CXCR5P32302 372 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 DMC1Q14565 340 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 ANKS3Q6ZW76 656 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 THEM5Q8N1Q8 247 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 EGFL8Q99944 293 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 DISP3Q9P2K9 1392 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 CNOT6LQ96LI5 555 aaKnown RBP12.22□□□□□ -0.45
PTPN4-201ENST00000263708 ITSN2Q9NZM3 1697 aa12.22□□□□□ -0.45
PTPN4-201ENST00000263708 PSMC2P35998 433 aaKnown RBP12.22□□□□□ -0.45
PTPN4-201ENST00000263708 TBL3Q12788 808 aaKnown RBP12.22□□□□□ -0.45
PTPN4-201ENST00000263708 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms