RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 CLMNQ96JQ2 1002 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 BHMT2Q9H2M3 363 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 TBC1D7Q9P0N9 293 aa17.59■□□□□ 0.41
VPS26A-201ENST00000263559 MYPNQ86TC9 1320 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 DDX39AO00148 427 aaKnown RBP17.58■□□□□ 0.41
VPS26A-201ENST00000263559 EYA4O95677 639 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 GIT2Q14161 759 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 PLS1Q14651 629 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 ARHGEF16Q5VV41 709 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 KCTD17Q8N5Z5 321 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 PIGOQ8TEQ8 1089 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 PCDHA2Q9Y5H9 948 aa17.58■□□□□ 0.41
VPS26A-201ENST00000263559 FRMD3A2A2Y4 597 aa17.58■□□□□ 0.4
VPS26A-201ENST00000263559 IRF6O14896 467 aa17.58■□□□□ 0.4
VPS26A-201ENST00000263559 DHX15O43143 795 aaKnown RBP17.58■□□□□ 0.4
VPS26A-201ENST00000263559 EEF1GP26641 437 aaKnown RBP17.58■□□□□ 0.4
VPS26A-201ENST00000263559 HOXA7P31268 230 aaPredicted RBP17.58■□□□□ 0.4
VPS26A-201ENST00000263559 NF2P35240 595 aa17.58■□□□□ 0.4
VPS26A-201ENST00000263559 EPHA7Q15375 998 aa17.58■□□□□ 0.4
VPS26A-201ENST00000263559 HERC4Q5GLZ8 1057 aaPredicted RBP17.58■□□□□ 0.4
VPS26A-201ENST00000263559 FGFBP2Q9BYJ0 223 aa17.58■□□□□ 0.4
VPS26A-201ENST00000263559 AGO4Q9HCK5 861 aaKnown RBP17.58■□□□□ 0.4
VPS26A-201ENST00000263559 ITGB3BPQ13352 177 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-201ENST00000263559 MTMR1Q13613 665 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 EAPPQ56P03 285 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-201ENST00000263559 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-201ENST00000263559 ANKRD13AQ8IZ07 590 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 OTUD5Q96G74 571 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 ZBTB39O15060 712 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 PPATQ06203 517 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 TTLL12Q14166 644 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-201ENST00000263559 REEP2Q9BRK0 252 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 ZHX3Q9H4I2 956 aa17.57■□□□□ 0.4
VPS26A-201ENST00000263559 WRAP73Q9P2S5 460 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-201ENST00000263559 MAGEC2Q9UBF1 373 aaPredicted RBP17.57■□□□□ 0.4
VPS26A-201ENST00000263559 ADKP55263 362 aaKnown RBP17.56■□□□□ 0.4
VPS26A-201ENST00000263559 ILDR2Q71H61 639 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 ERO1BQ86YB8 467 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 MYOCDQ8IZQ8 938 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 RUSC1Q9BVN2 902 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 TMX1Q9H3N1 280 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 TAF1DQ9H5J8 278 aaPredicted RBP17.56■□□□□ 0.4
VPS26A-201ENST00000263559 ACAD9Q9H845 621 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 GADL1Q6ZQY3 521 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 TC2NQ8N9U0 490 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 SCN4AP35499 1836 aa17.56■□□□□ 0.4
VPS26A-201ENST00000263559 PEX10O60683 326 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 MUTP22033 750 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 DNTTIP2Q5QJE6 756 aaKnown RBP17.55■□□□□ 0.4
VPS26A-201ENST00000263559 CEP135Q66GS9 1140 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 A1CFQ9NQ94 594 aaKnown RBP17.55■□□□□ 0.4
VPS26A-201ENST00000263559 CYP39A1Q9NYL5 469 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 LOC285556D6RIA3 1793 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 A0A0G2JLL6 359 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-201ENST00000263559 NR3C2P08235 984 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 RINT1Q6NUQ1 792 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 MIER3Q7Z3K6 550 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 PRRT2Q7Z6L0 340 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-201ENST00000263559 VSIG10LQ86VR7 867 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 BANK1Q8NDB2 785 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 CNOT6LQ96LI5 555 aaKnown RBP17.55■□□□□ 0.4
VPS26A-201ENST00000263559 TESPA1A2RU30 521 aaPredicted RBP17.55■□□□□ 0.4
VPS26A-201ENST00000263559 NRDCO43847 1150 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 UBXN1Q04323 297 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 RBL2Q08999 1139 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 LBX2Q6XYB7 198 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 NACC1Q96RE7 527 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 LXNQ9BS40 222 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 TUBGCP2Q9BSJ2 902 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 POLD4Q9HCU8 107 aa17.55■□□□□ 0.4
VPS26A-201ENST00000263559 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
VPS26A-201ENST00000263559 SPDYE5A6NIY4 337 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 USP27XA6NNY8 438 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 RSPH10B2B2RC85 870 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 ATP9AO75110 1047 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 RSPH10BP0C881 870 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 LRRC63Q05C16 580 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 FAM114A1Q8IWE2 563 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 PROCA1Q8NCQ7 364 aaPredicted RBP17.54■□□□□ 0.4
VPS26A-201ENST00000263559 CCDC112Q8NEF3 446 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 TBC1D22BQ9NU19 505 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 BTBD7Q9P203 1132 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 ITIH6Q6UXX5 1313 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 KIAA1217Q5T5P2 1943 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 CCND2P30279 289 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 XRRA1Q6P2D8 792 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 TMEM139Q8IV31 216 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 NSUN6Q8TEA1 469 aaKnown RBP17.54■□□□□ 0.4
VPS26A-201ENST00000263559 CPLX3Q8WVH0 158 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 SCFD1Q8WVM8 642 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 BCAS3Q9H6U6 928 aa17.54■□□□□ 0.4
VPS26A-201ENST00000263559 LGALS16A8MUM7 142 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 CXCL11O14625 94 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 NKRFO15226 690 aaKnown RBP eCLIP17.53■□□□□ 0.4
VPS26A-201ENST00000263559 PRKCSHP14314 528 aaPredicted RBP17.53■□□□□ 0.4
VPS26A-201ENST00000263559 C1orf186Q6ZWK4 172 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 PPFIBP1Q86W92 1011 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 SFR1Q86XK3 245 aa17.53■□□□□ 0.4
VPS26A-201ENST00000263559 ZNF507Q8TCN5 953 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms