RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.61
NOTCH3-201ENST00000263388 TMEM232C9JQI7 657 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 M0R2C6 588 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 ATICP31939 592 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 ARL4AP40617 200 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 ZBED6P86452 979 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 DARS2Q6PI48 645 aaKnown RBP18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 SLFN14P0C7P3 912 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 DIS3Q9Y2L1 958 aaKnown RBP18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 SOWAHDA6NJG2 315 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 MT-ND3P03897 115 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 NT5C2P49902 561 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 CENPUQ71F23 418 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 SESTD1Q86VW0 696 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 SRPRBQ9Y5M8 271 aaKnown RBP18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 CCND2P30279 289 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 SNX1Q13596 522 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 KSR1Q8IVT5 923 aa18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 SMYD4Q8IYR2 804 aaPredicted RBP18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 PACSIN2Q9UNF0 486 aaPredicted RBP18.83■□□□□ 0.6
NOTCH3-201ENST00000263388 FAM133AQ8N9E0 248 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 DONSONQ9NYP3 566 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 TBK1Q9UHD2 729 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 LEMD3Q9Y2U8 911 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 ATP5HO75947 161 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 TJP3O95049 919 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 IL1RL1Q01638 556 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 SURF1Q15526 300 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 TRAIPQ9BWF2 469 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 DTNBO60941 627 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 ZMYND10O75800 440 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 GLE1Q53GS7 698 aaKnown RBP18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 NNTQ13423 1086 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 RASGRF2O14827 1237 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 NVLO15381 856 aaKnown RBP18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 CRLF3Q8IUI8 442 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 MAML1Q92585 1016 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 PHKG2P15735 406 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 KRT39Q6A163 491 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 YEATS2Q9ULM3 1422 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 FRMD3A2A2Y4 597 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 THOC5Q13769 683 aaKnown RBP18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 VSTM4Q8IW00 320 aa18.82■□□□□ 0.6
NOTCH3-201ENST00000263388 PMLP29590 882 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 ANKRD13CQ8N6S4 541 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 LCMT1Q9UIC8 334 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 MAP3K4Q9Y6R4 1608 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 UBE2TQ9NPD8 197 aaPredicted RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 KRT1P04264 644 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 BASP1P80723 227 aaKnown RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 TCP11X2Q5H9J9 407 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 ARL6IP4Q66PJ3 421 aaKnown RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 PRKG1Q13976 671 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 METTL23Q86XA0 190 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 PIP4K2CQ8TBX8 421 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 DHX38Q92620 1227 aaKnown RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 CALN1Q9BXU9 219 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 PAMP19021 973 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 XPAP23025 273 aaPredicted RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 CCNYQ8ND76 341 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 CDK12Q9NYV4 1490 aaPredicted RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 FGD4Q96M96 766 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 NUDCD1Q96RS6 583 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 NUMA1Q14980 2115 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 PRPSAP2O60256 369 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 TOM1L1O75674 476 aa18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 NSUN7Q8NE18 718 aaKnown RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 ENOX1Q8TC92 643 aaKnown RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 PAWRQ96IZ0 340 aaKnown RBP18.81■□□□□ 0.6
NOTCH3-201ENST00000263388 PPARGP37231 505 aaPredicted RBP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 NCAPG2Q86XI2 1143 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 PRPF38AQ8NAV1 312 aaKnown RBP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 PI4K2BQ8TCG2 481 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 PYROXD1Q8WU10 500 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 CASP8Q14790 479 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ABI1Q8IZP0 508 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ABTB1Q969K4 478 aaPredicted RBP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 GFPT2O94808 682 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 KCNA4P22459 653 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 FAM133BQ5BKY9 247 aaKnown RBP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 PDIK1LQ8N165 341 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ARHGAP31Q2M1Z3 1444 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 PLS3P13797 630 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 MOCS3O95396 460 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 KIAA0825Q8IV33 1275 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 CHEK2O96017 543 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 SCNN1DP51172 638 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ADCK5Q3MIX3 580 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 C11orf57Q6ZUT1 292 aaPredicted RBP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 RHOT2Q8IXI1 618 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ST13P4Q8IZP2 240 aaPredicted RBP18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 TBCKQ8TEA7 893 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
NOTCH3-201ENST00000263388 ARL13BQ3SXY8 428 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 GDAP1Q8TB36 358 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 LRRC24Q50LG9 513 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 ESRRAP11474 423 aaPredicted RBP18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 PLCG1P19174 1290 aa18.79■□□□□ 0.6
NOTCH3-201ENST00000263388 PDXDC1Q6P996 788 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms