RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 USP17L3A6NCW0 530 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 USP17L4A6NCW7 530 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 CSPG5O95196 566 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 ICA1Q05084 483 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 TOB2Q14106 344 aaPredicted RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 CDO1Q16878 200 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 USP17L1Q7RTZ2 530 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 DNAAF3Q8N9W5 541 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 DEPDC1BQ8WUY9 529 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 FOXN1O15353 648 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 TEX33O43247 280 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 EVI5O60447 810 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 SKIP12755 728 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 YWHAEP62258 255 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 FBXW10Q5XX13 1052 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 ABCC12Q96J65 1359 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 DNAJC6O75061 913 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 GDF11O95390 407 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 GUCY1A3Q02108 690 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 NKX1-1Q15270 411 aaPredicted RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 PI4K2BQ8TCG2 481 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 ZNF577Q9BSK1 485 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 CNOT10Q9H9A5 744 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 NXF1Q9UBU9 619 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 SSTR3P32745 418 aaPredicted RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 HSP90AA5PQ58FG0 334 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 PBKQ96KB5 322 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 EMILIN3Q9NT22 766 aa13.03□□□□□ -0.32
SMG6-201ENST00000263073 NOP53Q9NZM5 478 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 SRPRBQ9Y5M8 271 aaKnown RBP13.03□□□□□ -0.32
SMG6-201ENST00000263073 KDM5AP29375 1690 aaKnown RBP13.02□□□□□ -0.32
SMG6-201ENST00000263073 HMGB1P1B2RPK0 211 aaPredicted RBP13.02□□□□□ -0.32
SMG6-201ENST00000263073 USP17L8P0C7I0 530 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 ART3Q13508 389 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 IRX2Q9BZI1 471 aaPredicted RBP13.02□□□□□ -0.32
SMG6-201ENST00000263073 CPVLQ9H3G5 476 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 KCNF1Q9H3M0 494 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 OSBPL3Q9H4L5 887 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 SAYSD1Q9NPB0 183 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 TTC7AQ9ULT0 858 aaPredicted RBP13.02□□□□□ -0.32
SMG6-201ENST00000263073 ZNF185O15231 689 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 RNF207Q6ZRF8 634 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 RGS9BPQ6ZS82 235 aa13.02□□□□□ -0.32
SMG6-201ENST00000263073 CTTNQ14247 550 aaKnown RBP13.02□□□□□ -0.33
SMG6-201ENST00000263073 SPOPLQ6IQ16 392 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 THAP9Q9H5L6 903 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 EPS15L1Q9UBC2 864 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 HESX1Q9UBX0 185 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 IVNS1ABPQ9Y6Y0 642 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 RANBP1P43487 201 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 KCNQ4P56696 695 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 TTLL11Q8NHH1 800 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 ECT2Q9H8V3 914 aa13.02□□□□□ -0.33
SMG6-201ENST00000263073 OATP04181 439 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 PHKG2P15735 406 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 SLMAPQ14BN4 828 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 PASD1Q8IV76 773 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 OXER1Q8TDS5 423 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 FGD4Q96M96 766 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 RNF26Q9BY78 433 aaPredicted RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 CCPG1Q9ULG6 757 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 EEF1DP29692 281 aaKnown RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 FAM47CQ5HY64 1035 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 PCGF5Q86SE9 256 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 SRRM1Q8IYB3 904 aaKnown RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 TRIML2Q8N7C3 387 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 FAM149B1Q96BN6 582 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 IWS1Q96ST2 819 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 PPARGC1AQ9UBK2 798 aaKnown RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 LRRC53A6NM62 1247 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 UBAP1LF5GYI3 381 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 SPAG7O75391 227 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 HOXA13P31271 388 aaPredicted RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 ADD2P35612 726 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 MYO1EQ12965 1108 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 NECTIN1Q15223 517 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 DLGAP5Q15398 846 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 ZBTB8OSQ8IWT0 167 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 C7orf31Q8N865 590 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 ATP6V1E2Q96A05 226 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 WDR24Q96S15 920 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 CCDC68Q9H2F9 335 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 MAPK13O15264 365 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 PDE8BO95263 885 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 FKBP3Q00688 224 aaKnown RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 MKRN4PQ13434 485 aaPredicted RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 RESP18Q5W5W9 173 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 CDC26Q8NHZ8 85 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 ANGPTL2Q9UKU9 493 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 MYOM2P54296 1465 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 MCF2LO15068 1137 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 GSTA4O15217 222 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 GYG2O15488 501 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 ATP1A1P05023 1023 aaKnown RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 MDH1BQ5I0G3 518 aa13.01□□□□□ -0.33
SMG6-201ENST00000263073 SPOUT1Q5T280 376 aaKnown RBP13.01□□□□□ -0.33
SMG6-201ENST00000263073 OSBPL1AQ9BXW6 950 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms