RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 MYO1FO00160 1098 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 PPP1R37O75864 691 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 RASSF9O75901 435 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 PLCG1P19174 1290 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 CLK2P49760 499 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 RBM5P52756 815 aaKnown RBP eCLIP11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 TRAF1Q13077 416 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 EZH2Q15910 746 aaKnown RBP11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 PTGISQ16647 500 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 CFAP58Q5T655 872 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 WLSQ5T9L3 541 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 CNNM4Q6P4Q7 775 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 KIAA0825Q8IV33 1275 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC50Q8IVM0 306 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 MAGEC3Q8TD91 643 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 ZKSCAN4Q969J2 545 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC42Q96M95 316 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 ALS2CR12Q96Q35 445 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 ERGIC2Q96RQ1 377 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 JPH2Q9BR39 696 aaPredicted RBP11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 GDF3Q9NR23 364 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 KLC4Q9NSK0 619 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 AGPAT5Q9NUQ2 364 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 MCM8Q9UJA3 840 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 GDAQ9Y2T3 454 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 ADAMTSL1Q8N6G6 1762 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 SLX4Q8IY92 1834 aa11.89□□□□□ -0.51
CHRNA1-201ENST00000261007 MACROD2A1Z1Q3 448 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 RASSF10A6NK89 507 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 HMGB1P1B2RPK0 211 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 KLRC4O43908 158 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 EIF6P56537 245 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 NFIAQ12857 509 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 PAK2Q13177 524 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 SLC15A2Q16348 729 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC181Q5TID7 509 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 MSL1Q68DK7 614 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 C8orf74Q6P047 294 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 MOXD1Q6UVY6 613 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 C6orf89Q6UWU4 347 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 GMCL1P1Q8NEA9 526 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 COA7Q96BR5 231 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 CDK5RAP3Q96JB5 506 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TUBGCP2Q9BSJ2 902 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TRIM9Q9C026 710 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TMOD2Q9NZR1 351 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 LRWD1Q9UFC0 647 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 DUSP10Q9Y6W6 482 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 SIPA1L1O43166 1804 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 PVALEFA0A1B0GWK0 134 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 PJA2O43164 708 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 FAM107AO95990 144 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 MDH1P40925 334 aaKnown RBP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TECP42680 631 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 SLC1A4P43007 532 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TBC1D8BQ0IIM8 1120 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 AP3B2Q13367 1082 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 SEPT2Q15019 361 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC40Q4G0X9 1142 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 KRT79Q5XKE5 535 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TTC19Q6DKK2 380 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TTI2Q6NXR4 508 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TAX1BP1Q86VP1 789 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 ZSCAN29Q8IWY8 852 aaPredicted RBP11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 ARFGAP2Q8N6H7 521 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 C7orf43Q8WVR3 580 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TRIM47Q96LD4 638 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 VPS33BQ9H267 617 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 PSTPIP2Q9H939 334 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 FAM198AQ9UFP1 575 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 PCDHA13Q9Y5I0 950 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 STK24Q9Y6E0 443 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 KDM3AQ9Y4C1 1321 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 PSME4Q14997 1843 aa11.88□□□□□ -0.51
CHRNA1-201ENST00000261007 TRIM49BA6NDI0 452 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 PP2D1A8MPX8 630 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 B4DLN1 442 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 PES1O00541 588 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 NR1D1P20393 614 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ATP2B2Q01814 1243 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ICA1Q05084 483 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 SLFN13Q68D06 897 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 FOXR2Q6PJQ5 311 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 NLRP14Q86W24 1093 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 RNF10Q8N5U6 811 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 EIF1ADQ8N9N8 165 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 BANK1Q8NDB2 785 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 MYCBPAPQ8TBZ2 947 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 WHAMMQ8TF30 809 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 GMCL1Q96IK5 515 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 CCT8L2Q96SF2 557 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 IFIH1Q9BYX4 1025 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 RABEP2Q9H5N1 569 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 DNAJC18Q9H819 358 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 TMEM260Q9NX78 707 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms