RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 BHMT2Q9H2M3 363 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 IMPACTQ9P2X3 320 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 PYCARDQ9ULZ3 195 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 AGTPBP1Q9UPW5 1226 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 LCTP09848 1927 aa24.91■■□□□ 1.58
SIX3-201ENST00000260653 NR3C2P08235 984 aa24.9■■□□□ 1.58
SIX3-201ENST00000260653 GJA5P36382 358 aa24.9■■□□□ 1.58
SIX3-201ENST00000260653 PIGOQ8TEQ8 1089 aa24.9■■□□□ 1.58
SIX3-201ENST00000260653 P2RX5Q93086 422 aa24.9■■□□□ 1.58
SIX3-201ENST00000260653 TRIM47Q96LD4 638 aa24.9■■□□□ 1.58
SIX3-201ENST00000260653 MB21D1Q8N884 522 aa24.9■■□□□ 1.58
SIX3-201ENST00000260653 WRAP73Q9P2S5 460 aaPredicted RBP24.9■■□□□ 1.58
SIX3-201ENST00000260653 A0A1B0GTH6 734 aa24.89■■□□□ 1.58
SIX3-201ENST00000260653 KRT18P05783 430 aaKnown RBP24.89■■□□□ 1.58
SIX3-201ENST00000260653 CCNE1P24864 410 aa24.89■■□□□ 1.58
SIX3-201ENST00000260653 CCND2P30279 289 aa24.89■■□□□ 1.58
SIX3-201ENST00000260653 EPHA7Q15375 998 aa24.89■■□□□ 1.58
SIX3-201ENST00000260653 VSIG10LQ86VR7 867 aa24.89■■□□□ 1.58
SIX3-201ENST00000260653 LRRC8AQ8IWT6 810 aa24.89■■□□□ 1.58
SIX3-201ENST00000260653 NSUN6Q8TEA1 469 aaKnown RBP24.89■■□□□ 1.58
SIX3-201ENST00000260653 EYA4O95677 639 aa24.89■■□□□ 1.57
SIX3-201ENST00000260653 CLCN1P35523 988 aa24.89■■□□□ 1.57
SIX3-201ENST00000260653 HERVK_113P62684 666 aa24.89■■□□□ 1.57
SIX3-201ENST00000260653 CHST13Q8NET6 341 aa24.89■■□□□ 1.57
SIX3-201ENST00000260653 DUSP9Q99956 384 aaKnown RBP24.89■■□□□ 1.57
SIX3-201ENST00000260653 PAGR1Q9BTK6 254 aa24.89■■□□□ 1.57
SIX3-201ENST00000260653 ZBTB39O15060 712 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 PPP1R2P41236 205 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 PSMD2Q13200 908 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 ANKRD40Q6AI12 368 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 IRF2BP1Q8IU81 584 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 ZNF500O60304 480 aaPredicted RBP24.88■■□□□ 1.57
SIX3-201ENST00000260653 ATP9AO75110 1047 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 NR1I3Q14994 352 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 KRT31Q15323 416 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 LRRC41Q15345 812 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 FAM26FQ5R3K3 315 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 MIER3Q7Z3K6 550 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 CCDC65Q8IXS2 484 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 BANK1Q8NDB2 785 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 LXNQ9BS40 222 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 SPATC1LQ9H0A9 340 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 TBC1D7Q9P0N9 293 aa24.88■■□□□ 1.57
SIX3-201ENST00000260653 ADD3Q9UEY8 706 aaKnown RBP24.88■■□□□ 1.57
SIX3-201ENST00000260653 KCNJ18B7U540 433 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 KCNJ12Q14500 433 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 TCP11X2Q5H9J9 407 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 XRRA1Q6P2D8 792 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 RIOX2Q8IUF8 465 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 EEF2KMTQ96G04 330 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 REEP2Q9BRK0 252 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 RUSC1Q9BVN2 902 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 SRRTQ9BXP5 876 aaKnown RBP24.87■■□□□ 1.57
SIX3-201ENST00000260653 FGFBP2Q9BYJ0 223 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 SEMA6BQ9H3T3 888 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 KIAA1217Q5T5P2 1943 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 GSDMDP57764 484 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 GIT2Q14161 759 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 C17orf53Q8N3J3 647 aaPredicted RBP24.87■■□□□ 1.57
SIX3-201ENST00000260653 GUF1Q8N442 669 aaKnown RBP24.87■■□□□ 1.57
SIX3-201ENST00000260653 KCTD17Q8N5Z5 321 aa24.87■■□□□ 1.57
SIX3-201ENST00000260653 BICDL2A1A5D9 508 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 FRMD3A2A2Y4 597 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 TEX33O43247 280 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 CREBRFQ8IUR6 639 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 CSGALNACT2Q8N6G5 542 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 SLC10A4Q96EP9 437 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 CTAGE1Q96RT6 745 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 ZHX3Q9H4I2 956 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 LIMA1Q9UHB6 759 aaKnown RBP24.86■■□□□ 1.57
SIX3-201ENST00000260653 CNMDO75829 334 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 HERC4Q5GLZ8 1057 aaPredicted RBP24.86■■□□□ 1.57
SIX3-201ENST00000260653 ARMCX5Q6P1M9 558 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 ANKRD35Q8N283 1001 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 INPP4AQ96PE3 977 aaPredicted RBP24.86■■□□□ 1.57
SIX3-201ENST00000260653 RRAGCQ9HB90 399 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 TBC1D22BQ9NU19 505 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 PCDHA2Q9Y5H9 948 aa24.86■■□□□ 1.57
SIX3-201ENST00000260653 RGS20O76081 388 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 CNTN2Q02246 1040 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 SPAG1Q07617 926 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 CENPPQ6IPU0 288 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 FASTKD5Q7L8L6 764 aaKnown RBP24.85■■□□□ 1.57
SIX3-201ENST00000260653 ASTN1O14525 1302 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 MUTP22033 750 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 GPAT2Q6NUI2 795 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 NCAPG2Q86XI2 1143 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 MAF1Q9H063 256 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 THAP9Q9H5L6 903 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 SAMM50Q9Y512 469 aa24.85■■□□□ 1.57
SIX3-201ENST00000260653 KIAA1524Q8TCG1 905 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 GPRASP2Q96D09 838 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 R3HDMLQ9H3Y0 253 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 TXNRD2Q9NNW7 524 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 TAB2Q9NYJ8 693 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 LRRC10BA6NIK2 292 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 SNAPC2Q13487 334 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 RINT1Q6NUQ1 792 aa24.84■■□□□ 1.57
SIX3-201ENST00000260653 MOV10L1Q9BXT6 1211 aaKnown RBP24.84■■□□□ 1.57
SIX3-201ENST00000260653 FBXO40Q9UH90 709 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms