RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 USH1GQ495M9 461 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 USP17L2Q6R6M4 530 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 C3orf67Q6ZVT6 689 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 CNBD1Q8NA66 436 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 MSANTD4Q8NCY6 345 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 COA7Q96BR5 231 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 CDCA7Q9BWT1 371 aaPredicted RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 ARMCX3Q9UH62 379 aaPredicted RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 NUP188Q5SRE5 1749 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 SFI1A8K8P3 1242 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 RNF225M0QZC1 329 aaPredicted RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 PGRMC1O00264 195 aaKnown RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 MAP2K7O14733 419 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 FANCGO15287 622 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 ALDH3A1P30838 453 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 PABPC4Q13310 644 aaKnown RBP eCLIP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 NKX1-1Q15270 411 aaPredicted RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 SPATS2Q86XZ4 545 aaKnown RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 SCYL3Q8IZE3 742 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 GEMIN8Q9NWZ8 242 aaKnown RBP16.19■□□□□ 0.18
KCTD3-201ENST00000259154 TSKSQ9UJT2 592 aa16.19■□□□□ 0.18
KCTD3-201ENST00000259154 ADAMTS3O15072 1205 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 LIFRP42702 1097 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TMCO4Q5TGY1 634 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 ZNF365Q70YC5 407 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 SHISA4Q96DD7 197 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 KIAA1024Q9UPX6 916 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 GSG1L2A8MUP6 293 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 FAM153BP0C7A2 387 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 EPB41P11171 864 aaKnown RBP16.18■□□□□ 0.18
KCTD3-201ENST00000259154 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
KCTD3-201ENST00000259154 NR2F2P24468 414 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 GBP1P32455 592 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TSNAXIP1Q2TAA8 658 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 FAM153CQ494X1 144 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TAOK1Q7L7X3 1001 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
KCTD3-201ENST00000259154 SUPT20HQ8NEM7 779 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 ZBTB10Q96DT7 871 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TRIM51Q9BSJ1 452 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 FAM153AQ9UHL3 310 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.18■□□□□ 0.18
KCTD3-201ENST00000259154 USP17L8P0C7I0 530 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 XRCC5P13010 732 aaKnown RBP16.18■□□□□ 0.18
KCTD3-201ENST00000259154 STAT1P42224 750 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TXNRD1Q16881 649 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 HHATQ5VTY9 493 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 TBCKQ8TEA7 893 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 EPN3Q9H201 632 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 VPS37BQ9H9H4 285 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 PANK4Q9NVE7 773 aa16.18■□□□□ 0.18
KCTD3-201ENST00000259154 HMGB1P1B2RPK0 211 aaPredicted RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 LONP1P36776 959 aaKnown RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 MTM1Q13496 603 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 RBBP5Q15291 538 aaKnown RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 MAN2A1Q16706 1144 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 C6orf163Q5TEZ5 329 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 ALKBH5Q6P6C2 394 aaKnown RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 ENAHQ8N8S7 591 aaPredicted RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 SAAL1Q96ER3 474 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 CYFIP2Q96F07 1278 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 HOMER3Q9NSC5 361 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 PPP1R3GB7ZBB8 358 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 VWA3BQ502W6 1294 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 SLC44A5Q8NCS7 719 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 AZI2Q9H6S1 392 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 LRRD1A4D1F6 860 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 UFL1O94874 794 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 UPP2O95045 317 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 RAB17Q9H0T7 212 aa16.17■□□□□ 0.18
KCTD3-201ENST00000259154 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
KCTD3-201ENST00000259154 CCDC169A6NNP5 214 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 THAP12O43422 761 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 SYF2O95926 243 aaKnown RBP16.16■□□□□ 0.18
KCTD3-201ENST00000259154 KLRK1P26718 216 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 EXOC3L4Q17RC7 722 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 TEX2Q8IWB9 1127 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 MYCBPAPQ8TBZ2 947 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 IRAK4Q9NWZ3 460 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 A0A087X0B3 334 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 RAD51CO43502 376 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 KCNQ2O43526 872 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 SUN1O94901 812 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 MYCT1Q8N699 235 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 NSMCE1Q8WV22 266 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 CYTH2Q99418 400 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 LRRC27Q9C0I9 530 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 HPSEQ9Y251 543 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 HARSP12081 509 aaKnown RBP16.16■□□□□ 0.18
KCTD3-201ENST00000259154 CAPRIN2Q6IMN6 1127 aaKnown RBP16.16■□□□□ 0.18
KCTD3-201ENST00000259154 LARP4BQ92615 738 aaKnown RBP16.16■□□□□ 0.18
KCTD3-201ENST00000259154 SRP68Q9UHB9 627 aaKnown RBP16.16■□□□□ 0.18
KCTD3-201ENST00000259154 PCDHA12Q9UN75 941 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 AKAP11Q9UKA4 1901 aa16.16■□□□□ 0.18
KCTD3-201ENST00000259154 TTI1O43156 1089 aa16.15■□□□□ 0.18
KCTD3-201ENST00000259154 GLI1P08151 1106 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms