RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 B3GNT9Q6UX72 402 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 PRIMPOLQ96LW4 560 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 STK24Q9Y6E0 443 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 PVALEFA0A1B0GWK0 134 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 ZBTB39O15060 712 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 CNMDO75829 334 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 ARSHQ5FYA8 562 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 GPAT2Q6NUI2 795 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 CNNM4Q6P4Q7 775 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 PIGOQ8TEQ8 1089 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 RIT2Q99578 217 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 SPATC1LQ9H0A9 340 aa21.06■□□□□ 0.96
TRIM47-201ENST00000254816 ATP9AO75110 1047 aa21.05■□□□□ 0.96
TRIM47-201ENST00000254816 CCND2P30279 289 aa21.05■□□□□ 0.96
TRIM47-201ENST00000254816 NCAPG2Q86XI2 1143 aa21.05■□□□□ 0.96
TRIM47-201ENST00000254816 LRRC8AQ8IWT6 810 aa21.05■□□□□ 0.96
TRIM47-201ENST00000254816 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
TRIM47-201ENST00000254816 WRAP73Q9P2S5 460 aaPredicted RBP21.05■□□□□ 0.96
TRIM47-201ENST00000254816 CNTN2Q02246 1040 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 SEMA3FQ13275 785 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 STIM1Q13586 685 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 CDKAL1Q5VV42 579 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 VSIG10LQ86VR7 867 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 RIOX2Q8IUF8 465 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 ANKRD35Q8N283 1001 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 MB21D1Q8N884 522 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 BANK1Q8NDB2 785 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 GLIS3Q8NEA6 775 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 CHST13Q8NET6 341 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 NSUN6Q8TEA1 469 aaKnown RBP21.04■□□□□ 0.96
TRIM47-201ENST00000254816 BHMT2Q9H2M3 363 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 TXNRD2Q9NNW7 524 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 PANK4Q9NVE7 773 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 WDR81Q562E7 1941 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 COASYQ13057 564 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 FASTKD5Q7L8L6 764 aaKnown RBP21.04■□□□□ 0.96
TRIM47-201ENST00000254816 SYT2Q8N9I0 419 aaPredicted RBP21.04■□□□□ 0.96
TRIM47-201ENST00000254816 TUFT1Q9NNX1 390 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 BMP2KQ9NSY1 1161 aaPredicted RBP21.04■□□□□ 0.96
TRIM47-201ENST00000254816 INTS13Q9NVM9 706 aa21.04■□□□□ 0.96
TRIM47-201ENST00000254816 PSMA7O14818 248 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 KRT18P05783 430 aaKnown RBP21.03■□□□□ 0.96
TRIM47-201ENST00000254816 EHHADHQ08426 723 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 LRRC41Q15345 812 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 EPHA7Q15375 998 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 MIER3Q7Z3K6 550 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 C16orf45Q96MC5 204 aaPredicted RBP21.03■□□□□ 0.96
TRIM47-201ENST00000254816 POLD4Q9HCU8 107 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 NMRK2Q9NPI5 230 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 TBC1D7Q9P0N9 293 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 SNAPC2Q13487 334 aa21.03■□□□□ 0.96
TRIM47-201ENST00000254816 MOV10L1Q9BXT6 1211 aaKnown RBP21.03■□□□□ 0.96
TRIM47-201ENST00000254816 CBFA2T2O43439 604 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 FSTL1Q12841 308 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 Q3C1V9 767 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 CREBRFQ8IUR6 639 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 ZHX3Q9H4I2 956 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 RBPJLQ9UBG7 517 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 ASTN1O14525 1302 aa21.02■□□□□ 0.96
TRIM47-201ENST00000254816 ZNFX1Q9P2E3 1918 aaKnown RBP21.02■□□□□ 0.96
TRIM47-201ENST00000254816 RGS20O76081 388 aa21.02■□□□□ 0.95
TRIM47-201ENST00000254816 CELF2O95319 508 aaKnown RBP21.02■□□□□ 0.95
TRIM47-201ENST00000254816 EYA4O95677 639 aa21.02■□□□□ 0.95
TRIM47-201ENST00000254816 EEF2KMTQ96G04 330 aa21.02■□□□□ 0.95
TRIM47-201ENST00000254816 DHTKD1Q96HY7 919 aaPredicted RBP21.02■□□□□ 0.95
TRIM47-201ENST00000254816 LXNQ9BS40 222 aa21.02■□□□□ 0.95
TRIM47-201ENST00000254816 FGFBP2Q9BYJ0 223 aa21.02■□□□□ 0.95
TRIM47-201ENST00000254816 GBA2Q9HCG7 927 aaPredicted RBP21.02■□□□□ 0.95
TRIM47-201ENST00000254816 SAMM50Q9Y512 469 aa21.02■□□□□ 0.95
TRIM47-201ENST00000254816 LOXHD1Q8IVV2 1947 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 ERCC3P19447 782 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 OSBPP22059 807 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 GIT2Q14161 759 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 ANKRD40Q6AI12 368 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 APTXQ7Z2E3 356 aaKnown RBP21.01■□□□□ 0.95
TRIM47-201ENST00000254816 P2RX5Q93086 422 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 TRIM47Q96LD4 638 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 RUSC1Q9BVN2 902 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 CYP2C8P10632 490 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 TTI2Q6NXR4 508 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 REEP2Q9BRK0 252 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 BCAS3Q9H6U6 928 aa21.01■□□□□ 0.95
TRIM47-201ENST00000254816 MYH11P35749 1972 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 CCNE1P24864 410 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 XRRA1Q6P2D8 792 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 CCDC65Q8IXS2 484 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 INPP4AQ96PE3 977 aaPredicted RBP21■□□□□ 0.95
TRIM47-201ENST00000254816 DUSP9Q99956 384 aaKnown RBP21■□□□□ 0.95
TRIM47-201ENST00000254816 SEMA6BQ9H3T3 888 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 TBC1D22BQ9NU19 505 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 FBXO40Q9UH90 709 aa21■□□□□ 0.95
TRIM47-201ENST00000254816 RSPH10B2B2RC85 870 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 RSPH10BP0C881 870 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 PSMD2Q13200 908 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 HERC4Q5GLZ8 1057 aaPredicted RBP20.99■□□□□ 0.95
TRIM47-201ENST00000254816 SRRTQ9BXP5 876 aaKnown RBP20.99■□□□□ 0.95
TRIM47-201ENST00000254816 RIOK3O14730 519 aaKnown RBP20.99■□□□□ 0.95
TRIM47-201ENST00000254816 SORBS3O60504 671 aa20.99■□□□□ 0.95
TRIM47-201ENST00000254816 SKILP12757 684 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms