RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 PDIA5Q14554 519 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 BRDTQ58F21 947 aaPredicted RBP15.91■□□□□ 0.14
VPS25-201ENST00000253794 ABHD15Q6UXT9 468 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 PCSK9Q8NBP7 692 aaKnown RBP15.91■□□□□ 0.14
VPS25-201ENST00000253794 AFG1LQ8WV93 481 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 SEPT1Q8WYJ6 367 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 GJA10Q969M2 543 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 TMEM106CQ9BVX2 250 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 TCEAL9Q9UHQ7 104 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 RCOR1Q9UKL0 485 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 EMSYQ7Z589 1322 aa15.91■□□□□ 0.14
VPS25-201ENST00000253794 MOXD2PA6NHM9 499 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 WDR64B1ANS9 1081 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 DNM1LO00429 736 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 PPP6R2O75170 966 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 C6orf222P0C671 652 aaPredicted RBP15.9■□□□□ 0.14
VPS25-201ENST00000253794 TXKP42681 527 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 MNX1P50219 401 aaPredicted RBP15.9■□□□□ 0.14
VPS25-201ENST00000253794 KRT85P78386 507 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 IL17AQ16552 155 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 DGKDQ16760 1214 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 DTHD1Q6ZMT9 781 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 AFAP1L1Q8TED9 768 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 FERMT2Q96AC1 680 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 TELO2Q9Y4R8 837 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 PCDHA10Q9Y5I2 948 aa15.9■□□□□ 0.14
VPS25-201ENST00000253794 SRPRBQ9Y5M8 271 aaKnown RBP15.9■□□□□ 0.14
VPS25-201ENST00000253794 NOP56O00567 594 aaKnown RBP15.89■□□□□ 0.13
VPS25-201ENST00000253794 ZEB2O60315 1214 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 MARCH6O60337 910 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 SUPT20HL2P0C7V6 817 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 PURAQ00577 322 aaKnown RBP15.89■□□□□ 0.13
VPS25-201ENST00000253794 EPHA7Q15375 998 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 TMEM266Q2M3C6 531 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 GNASQ5JWF2 1037 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 CLEC17AQ6ZS10 378 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 KCNG4Q8TDN1 519 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 ABHD8Q96I13 439 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 AK8Q96MA6 479 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 C16orf70Q9BSU1 422 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 RAB34Q9BZG1 259 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
VPS25-201ENST00000253794 DISC1Q9NRI5 854 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 TFIP11Q9UBB9 837 aaKnown RBP15.89■□□□□ 0.13
VPS25-201ENST00000253794 FBXO2Q9UK22 296 aaPredicted RBP15.89■□□□□ 0.13
VPS25-201ENST00000253794 PHF24Q9UPV7 400 aa15.89■□□□□ 0.13
VPS25-201ENST00000253794 DOCK5Q9H7D0 1870 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 DDX39AO00148 427 aaKnown RBP15.88■□□□□ 0.13
VPS25-201ENST00000253794 EML1O00423 815 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 SPTLC2O15270 562 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 CABYRO75952 493 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 F2P00734 622 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 MYCP01106 439 aaPredicted RBP15.88■□□□□ 0.13
VPS25-201ENST00000253794 PSAPP07602 524 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 TCF7P36402 384 aaPredicted RBP15.88■□□□□ 0.13
VPS25-201ENST00000253794 LONP1P36776 959 aaKnown RBP15.88■□□□□ 0.13
VPS25-201ENST00000253794 IRX5P78411 483 aaPredicted RBP15.88■□□□□ 0.13
VPS25-201ENST00000253794 BEX3Q00994 111 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 KCNA10Q16322 511 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 MIS18BP1Q6P0N0 1132 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 MIER3Q7Z3K6 550 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 NEK9Q8TD19 979 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 UIMC1Q96RL1 719 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 PCYT2Q99447 389 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 STK24Q9Y6E0 443 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 IGSF9BQ9UPX0 1349 aa15.88■□□□□ 0.13
VPS25-201ENST00000253794 HAS3O00219 553 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 SLC26A4O43511 780 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 LGALS2P05162 132 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 ASGR1P07306 291 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 COL6A1P12109 1028 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 MUTP22033 750 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 TECP42680 631 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 SLC26A2P50443 739 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 ACLYP53396 1101 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 CEBPZQ03701 1054 aaKnown RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 STK38Q15208 465 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 FOXD4L6Q3SYB3 417 aaPredicted RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 FOXD4L3Q6VB84 417 aaPredicted RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 PLPPR4Q7Z2D5 763 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 CCDC60Q8IWA6 550 aaPredicted RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 KRI1Q8N9T8 703 aaKnown RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 ZNF579Q8NAF0 562 aaKnown RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 LEO1Q8WVC0 666 aaPredicted RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 KAT2BQ92831 832 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 TNPO1Q92973 898 aaKnown RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 HSD17B14Q9BPX1 270 aa15.87■□□□□ 0.13
VPS25-201ENST00000253794 MAFBQ9Y5Q3 323 aaPredicted RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 KIAA0100Q14667 2235 aaKnown RBP15.87■□□□□ 0.13
VPS25-201ENST00000253794 VWA3AA6NCI4 1184 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 POTEMA6NI47 508 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 KBTBD13C9JR72 458 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 CHMP2AO43633 222 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 SORBS3O60504 671 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 LYPLA2O95372 231 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 TFRCP02786 760 aaKnown RBP15.86■□□□□ 0.13
VPS25-201ENST00000253794 SP4Q02446 784 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 UBE2Q1Q7Z7E8 422 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 TNS4Q8IZW8 715 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 KCTD17Q8N5Z5 321 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms