RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 MTMR4Q9NYA4 1195 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 TMEM59LQ9UK28 342 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 DIS3Q9Y2L1 958 aaKnown RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 GDAQ9Y2T3 454 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SBF1O95248 1867 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 KIAA1217Q5T5P2 1943 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PP2D1A8MPX8 630 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SLC37A4O43826 429 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 CPP00450 1065 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PARP1P09874 1014 aaKnown RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 CCNE1P24864 410 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SH3BGRP55822 239 aaPredicted RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 DIXDC1Q155Q3 683 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 BMT2Q1RMZ1 405 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 FAM47AQ5JRC9 791 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SLC27A3Q5K4L6 730 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 BICDL1Q6ZP65 573 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PNMA1Q8ND90 353 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PBKQ96KB5 322 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PNKPQ96T60 521 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 FGFBP2Q9BYJ0 223 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 RAB17Q9H0T7 212 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 TMOD2Q9NZR1 351 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 STK17AQ9UEE5 414 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 MTRF1LQ9UGC7 380 aaKnown RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 MYH10P35580 1976 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PHACTR2O75167 634 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 BAG3O95817 575 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 CDK8P49336 464 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 KCNMA1Q12791 1236 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 PDIA5Q14554 519 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 NFIL3Q16649 462 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 MOXD1Q6UVY6 613 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 LRIG3Q6UXM1 1119 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SMYD4Q8IYR2 804 aaPredicted RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 WDR66Q8TBY9 1149 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 GMLQ99445 158 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 HINFPQ9BQA5 517 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 CNTNAP1P78357 1384 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC188H7C350 402 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 ECM2O94769 699 aaPredicted RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 KRT18P05783 430 aaKnown RBP4.56□□□□□ -1.68
UBE4A-201ENST00000252108 HSPA6P17066 643 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 CDC25AP30304 524 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 STK4Q13043 487 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 ZBTB33Q86T24 672 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SP8Q8IXZ3 490 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SAMD15Q9P1V8 674 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 SALL4Q9UJQ4 1053 aa4.56□□□□□ -1.68
UBE4A-201ENST00000252108 hCG_1642624A0A1W2PR95 340 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 MEIS2O14770 477 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CETN2P41208 172 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ARSHQ5FYA8 562 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF444Q8N0Y2 327 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ERMNQ8TAM6 284 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 IGLV3-22A0A075B6J6 115 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TSPY2A6NKD2 308 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TNFRSF8P28908 595 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CIITAP33076 1130 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 LRRC63Q05C16 580 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 SLC15A2Q16348 729 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 MAN2A1Q16706 1144 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 SWT1Q5T5J6 900 aaKnown RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 KRT79Q5XKE5 535 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 HHIPL2Q6UWX4 724 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CACNA2D3Q8IZS8 1091 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF622Q969S3 477 aaKnown RBP eCLIP4.55□□□□□ -1.687e-8■■■□□ 16.9
UBE4A-201ENST00000252108 CAPZA3Q96KX2 299 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 SCLT1Q96NL6 688 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 JMJD4Q9H9V9 463 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 FAM114A2Q9NRY5 505 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TFCP2L1Q9NZI6 479 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 STIM2Q9P246 746 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 VAV3Q9UKW4 847 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 PLAGL2Q9UPG8 496 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ATP6V0A2Q9Y487 856 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 VGLL3A8MV65 326 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 BTNL10A8MVZ5 291 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 PLCG2P16885 1265 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ECHS1P30084 290 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 GBP2P32456 591 aaPredicted RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 PDE4DQ08499 809 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CETN1Q12798 172 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TXNRD1Q16881 649 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ZNF568Q3ZCX4 644 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TAOK1Q7L7X3 1001 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CCDC65Q8IXS2 484 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 C1orf131Q8NDD1 294 aaKnown RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 P2RX5Q93086 422 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CEP95Q96GE4 821 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 MOV10L1Q9BXT6 1211 aaKnown RBP4.55□□□□□ -1.68
UBE4A-201ENST00000252108 CENPHQ9H3R5 247 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 SIX2Q9NPC8 291 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 ST7Q9NRC1 585 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 FAM198AQ9UFP1 575 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 KDM3AQ9Y4C1 1321 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 TTC26A0AVF1 554 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 H3BQF6 201 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 AGPSO00116 658 aa4.55□□□□□ -1.68
UBE4A-201ENST00000252108 PLSCR1O15162 318 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms