RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 RNF207Q6ZRF8 634 aa17.21■□□□□ 0.34
SIN3B-201ENST00000248054 U2AF1L4Q8WU68 220 aaKnown RBP17.21■□□□□ 0.34
SIN3B-201ENST00000248054 STIM2Q9P246 746 aa17.21■□□□□ 0.34
SIN3B-201ENST00000248054 LTN1O94822 1766 aa17.21■□□□□ 0.34
SIN3B-201ENST00000248054 CNTNAP5Q8WYK1 1306 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 M0QZ92 97 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 PRELPP51888 382 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 TAOK1Q7L7X3 1001 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 A0A087WWV3 80 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 ERCC3P19447 782 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 KRT31Q15323 416 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 MRC1P22897 1456 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 CEP104O60308 925 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 FAM204AQ9H8W3 233 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 GINM1Q9NU53 330 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 TNNC2P02585 160 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 UBXN2AP68543 259 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 SPC25Q9HBM1 224 aa17.2■□□□□ 0.34
SIN3B-201ENST00000248054 MXRA7P84157 204 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 CC2D1AQ6P1N0 951 aaPredicted RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 NDST4Q9H3R1 872 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 MED4Q9NPJ6 270 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 PARP2Q9UGN5 583 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 SEPT9Q9UHD8 586 aaPredicted RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 TCRBV5S4A2TA0A5A2 114 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 MFAP3P55082 362 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 MUM1L1Q5H9M0 696 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 RSBN1LQ6PCB5 846 aaPredicted RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 FAM71BQ8TC56 605 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 ADPGKQ9BRR6 497 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 MAK16Q9BXY0 300 aaKnown RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 MIS12Q9H081 205 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 SEL1LQ9UBV2 794 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 TLDC2A0PJX2 215 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 PRPF6O94906 941 aaKnown RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 PDE6CP51160 858 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 KCTD17Q8N5Z5 321 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 MB21D1Q8N884 522 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 DAGLBQ8NCG7 672 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 GIMAP8Q8ND71 665 aaPredicted RBP17.19■□□□□ 0.34
SIN3B-201ENST00000248054 FAM151AQ8WW52 585 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 KMT5AQ9NQR1 393 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 PNMA3Q9UL41 463 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 CACNA1FO60840 1977 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 APBA1Q02410 837 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 SLC15A2Q16348 729 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 POMGNT1Q8WZA1 660 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 LPAR1Q92633 364 aa17.19■□□□□ 0.34
SIN3B-201ENST00000248054 CHRNA5P30532 468 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 CCT5P48643 541 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 KRT76Q01546 638 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 INTS8Q75QN2 995 aaKnown RBP17.18■□□□□ 0.34
SIN3B-201ENST00000248054 DPH6Q7L8W6 267 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 EPC1Q9H2F5 836 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 CHD2O14647 1828 aaKnown RBP17.18■□□□□ 0.34
SIN3B-201ENST00000248054 AK9Q5TCS8 1911 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 TBX3O15119 743 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 IL1R1P14778 569 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 GUCY2CP25092 1073 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 SFNP31947 248 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 LRRC41Q15345 812 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 CEP170P1Q96L14 293 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 COPB2P35606 906 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 TROAPQ12815 778 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 CCDC14Q49A88 953 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 NT5C1BQ96P26 610 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 LMO7Q8WWI1 1683 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 LGALS16A8MUM7 142 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 HNRNPDLO14979 420 aaKnown RBP17.18■□□□□ 0.34
SIN3B-201ENST00000248054 PPFIBP2Q8ND30 876 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 CPVLQ9H3G5 476 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 CDC23Q9UJX2 597 aa17.18■□□□□ 0.34
SIN3B-201ENST00000248054 LRRIQ4A6NIV6 560 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L15C9J2P7 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L13C9JLJ4 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L11C9JVI0 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L18D6R9N7 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L22D6RA61 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L17D6RBQ6 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L19D6RCP7 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L20D6RJB6 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 ATP1A3P13637 1013 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 RPS12P25398 132 aaKnown RBP17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L24Q0WX57 530 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 USP17L6PQ6QN14 398 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 GUF1Q8N442 669 aaKnown RBP17.17■□□□□ 0.34
SIN3B-201ENST00000248054 VGLL2Q8N8G2 317 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 BHMT2Q9H2M3 363 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 MFAP3LO75121 409 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 DCUN1D2Q6PH85 259 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 KCNK9Q9NPC2 374 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 GOLGA8KD6RF30 607 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 TADA2BQ86TJ2 420 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 GDAP1L1Q96MZ0 367 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
SIN3B-201ENST00000248054 MEIS1O00470 390 aa17.16■□□□□ 0.34
SIN3B-201ENST00000248054 CCDC110Q8TBZ0 833 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms