RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 SAMM50Q9Y512 469 aa20.9■□□□□ 0.94
TNFSF9-201ENST00000245817 A0A0G2JMZ2 1700 aa20.9■□□□□ 0.94
TNFSF9-201ENST00000245817 KRT18P05783 430 aaKnown RBP20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 IDEP14735 1019 aa20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 GCLCP48506 637 aaPredicted RBP20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 CNTN2Q02246 1040 aa20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 CTTNQ14247 550 aaKnown RBP20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 SARM1Q6SZW1 724 aa20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 SHCBP1Q8NEM2 672 aa20.89■□□□□ 0.94
TNFSF9-201ENST00000245817 PPP1R3GB7ZBB8 358 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 EIF3JO75822 258 aaKnown RBP20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 SLITRK3O94933 977 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 FCER1AP12319 257 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 HSPA6P17066 643 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 PPP1R2P41236 205 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 ALDH5A1P51649 535 aaPredicted RBP20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 ITGB3BPQ13352 177 aaPredicted RBP20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 NCAPHQ15003 741 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 TPD52L1Q16890 204 aaPredicted RBP20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 PAXIP1Q6ZW49 1069 aaPredicted RBP20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 GPBP1Q86WP2 473 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 CCDC102AQ96A19 550 aa20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 PARK7Q99497 189 aaKnown RBP20.89■□□□□ 0.93
TNFSF9-201ENST00000245817 DHX15O43143 795 aaKnown RBP20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 PTMAP06454 111 aaKnown RBP20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 KRT76Q01546 638 aa20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 B3GNT9Q6UX72 402 aa20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 SYT2Q8N9I0 419 aaPredicted RBP20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 GIMAP8Q8ND71 665 aaPredicted RBP20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 NACC1Q96RE7 527 aa20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 GDAQ9Y2T3 454 aa20.88■□□□□ 0.93
TNFSF9-201ENST00000245817 RASSF10A6NK89 507 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 AP5Z1O43299 807 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 EYA4O95677 639 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 P4HBP07237 508 aaKnown RBP20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 CD44P16070 742 aaKnown RBP20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 SFNP31947 248 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 JAK3P52333 1124 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 SLC12A3P55017 1021 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 PAK1Q13153 545 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 CCDC65Q8IXS2 484 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 CTNND2Q9UQB3 1225 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 NFE2L3Q9Y4A8 694 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 SYNRGQ9UMZ2 1314 aa20.87■□□□□ 0.93
TNFSF9-201ENST00000245817 PSMA7O14818 248 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 CDK11BP21127 795 aaKnown RBP20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 PRCPP42785 496 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 ZNF75DP51815 510 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 PSMC6P62333 389 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 PSMD2Q13200 908 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 SPATA1Q5VX52 437 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 DRC7Q8IY82 874 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 TRMT44Q8IYL2 757 aaKnown RBP20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 ANKRD13CQ8N6S4 541 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 FAM133AQ8N9E0 248 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 PANK4Q9NVE7 773 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 FANCLQ9NW38 375 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 RWDD2AQ9UIY3 292 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 WDR64B1ANS9 1081 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 ATP9AO75110 1047 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 CYP11B2P19099 503 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 STX17P56962 302 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 HTRA3P83110 453 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 RASAL3Q86YV0 1011 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 FAM43AQ8N2R8 423 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 NELFBQ8WX92 580 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 LXNQ9BS40 222 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 BHMT2Q9H2M3 363 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 ZSWIM4Q9H7M6 989 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 MAPK8IP1Q9UQF2 711 aa20.86■□□□□ 0.93
TNFSF9-201ENST00000245817 SOWAHBA6NEL2 793 aa20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 MANSC4A6NHS7 340 aaPredicted RBP20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 GOLGA6L6A8MZA4 724 aa20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 CYP4F22Q6NT55 531 aa20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 ZNF746Q6NUN9 644 aaPredicted RBP20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 ADSSL1Q8N142 457 aa20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 BANK1Q8NDB2 785 aa20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 RDM1Q8NG50 284 aa20.85■□□□□ 0.93
TNFSF9-201ENST00000245817 SPATA31C2B4DYI2 1134 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 SERPINC1P01008 464 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 SLC10A3P09131 477 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 GRM1Q13255 1194 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 PIGOQ8TEQ8 1089 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 DNAJC19Q96DA6 116 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 DHTKD1Q96HY7 919 aaPredicted RBP20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 NFASCO94856 1347 aa20.84■□□□□ 0.93
TNFSF9-201ENST00000245817 RGS20O76081 388 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 PGK2P07205 417 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 QARSP47897 775 aaKnown RBP20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 SEPT14Q6ZU15 432 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 ZHX3Q9H4I2 956 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 EFCC1Q9HA90 598 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 SLC39A2Q9NP94 309 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 MORF4L1Q9UBU8 362 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 IVNS1ABPQ9Y6Y0 642 aa20.83■□□□□ 0.93
TNFSF9-201ENST00000245817 BICDL2A1A5D9 508 aa20.83■□□□□ 0.92
TNFSF9-201ENST00000245817 CBFA2T2O43439 604 aa20.83■□□□□ 0.92
TNFSF9-201ENST00000245817 KCNA2P16389 499 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms