RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 FAM133BQ5BKY9 247 aaKnown RBP12.61□□□□□ -0.39
SOX9-201ENST00000245479 CNNM4Q6P4Q7 775 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 SLF2Q8IX21 1173 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 ADGRF4Q8IZF3 695 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 LRRC1Q9BTT6 524 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 PCIF1Q9H4Z3 704 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 FLT1P17948 1338 aa12.61□□□□□ -0.39
SOX9-201ENST00000245479 MYMKA6NI61 221 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 PPP1R37O75864 691 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 SEC24CP53992 1094 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 ADAM9Q13443 819 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 EZH2Q15910 746 aaKnown RBP12.6□□□□□ -0.39
SOX9-201ENST00000245479 TBC1D5Q92609 795 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 BCAS3Q9H6U6 928 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 BARHL2Q9NY43 387 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 RWDD2AQ9UIY3 292 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 DAGLAQ9Y4D2 1042 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 BACH1O14867 736 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 MYCLP12524 364 aaPredicted RBP12.6□□□□□ -0.39
SOX9-201ENST00000245479 DGKHQ86XP1 1220 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 MYCT1Q8N699 235 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 CYP2W1Q8TAV3 490 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 TBC1D16Q8TBP0 767 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 TEKT1Q969V4 418 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 SAAL1Q96ER3 474 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 THOC1Q96FV9 657 aaKnown RBP12.6□□□□□ -0.39
SOX9-201ENST00000245479 ZNF512BQ96KM6 892 aaPredicted RBP12.6□□□□□ -0.39
SOX9-201ENST00000245479 RAB21Q9UL25 225 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 TARSL2A2RTX5 802 aaKnown RBP12.6□□□□□ -0.39
SOX9-201ENST00000245479 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 STXBP3O00186 592 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 RGS16O15492 202 aaPredicted RBP12.6□□□□□ -0.39
SOX9-201ENST00000245479 GH2P01242 217 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 MXRA7P84157 204 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 ICA1Q05084 483 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 FAM26FQ5R3K3 315 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 KCNK18Q7Z418 384 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 TRIM9Q9C026 710 aa12.6□□□□□ -0.39
SOX9-201ENST00000245479 HMGB1P1B2RPK0 211 aaPredicted RBP12.59□□□□□ -0.39
SOX9-201ENST00000245479 PPEF1O14829 653 aaPredicted RBP12.59□□□□□ -0.39
SOX9-201ENST00000245479 SMIM24O75264 130 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 SATB1Q01826 763 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 KLHL30Q0D2K2 578 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 PPP2R5BQ15173 497 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 PRAMEF18Q5VWM3 479 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 CUL5Q93034 780 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 CCT8L2Q96SF2 557 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 BHMT2Q9H2M3 363 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 DDX4Q9NQI0 724 aaKnown RBP12.59□□□□□ -0.39
SOX9-201ENST00000245479 TMOD2Q9NZR1 351 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 CD2APQ9Y5K6 639 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 ZBTB39O15060 712 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 SCP2P22307 547 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 CCDC38Q502W7 563 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 ARMC2Q8NEN0 867 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 EHD4Q9H223 541 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 PLAAQ9Y263 795 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 WDR19Q8NEZ3 1342 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 C21orf2O43822 256 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
SOX9-201ENST00000245479 ZNF18P17022 549 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 ZBED6P86452 979 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 WDR93Q6P2C0 686 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 MYOCDQ8IZQ8 938 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 ZNF473Q8WTR7 871 aaKnown RBP12.59□□□□□ -0.39
SOX9-201ENST00000245479 YIPF3Q9GZM5 350 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 NDST4Q9H3R1 872 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 TOPAZ1Q8N9V7 1692 aa12.59□□□□□ -0.39
SOX9-201ENST00000245479 ANO9A1A5B4 782 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 KRIT1O00522 736 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 GBP1P32455 592 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 LSP1P33241 339 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 TSNAXIP1Q2TAA8 658 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.39
SOX9-201ENST00000245479 SPATA4Q8NEY3 305 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 CSRNP1Q96S65 589 aa12.58□□□□□ -0.39
SOX9-201ENST00000245479 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
SOX9-201ENST00000245479 SEMA3EO15041 775 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 PLCG2P16885 1265 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 EEF1GP26641 437 aaKnown RBP12.58□□□□□ -0.4
SOX9-201ENST00000245479 AOC3Q16853 763 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 NSMFQ6X4W1 530 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 PEX26Q7Z412 305 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 CNPY4Q8N129 248 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 KLHL29Q96CT2 875 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 AP1M1Q9BXS5 423 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 HAUS2Q9NVX0 235 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 SPATA31A5Q5VU36 1347 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 SPATA31A7Q8IWB4 1347 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 GMNCA6NCL1 334 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 EPHB6O15197 1021 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 FAM13AO94988 1023 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 NR2F2P24468 414 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 FUT2Q10981 343 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 SFMBT2Q5VUG0 894 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 DENND2CQ68D51 928 aa12.58□□□□□ -0.4
SOX9-201ENST00000245479 KIRREL3Q8IZU9 778 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms