RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 GPR142Q7Z601 462 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 TEX2Q8IWB9 1127 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 FBXO16Q8IX29 292 aaPredicted RBP14.46□□□□□ -0.09
HIF3A-201ENST00000244302 RAD54LQ92698 747 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 TEKT3Q9BXF9 490 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 MROH8Q9H579 483 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 GDAQ9Y2T3 454 aa14.46□□□□□ -0.09
HIF3A-201ENST00000244302 MCM3APO60318 1980 aa14.46□□□□□ -0.1
HIF3A-201ENST00000244302 DOCK5Q9H7D0 1870 aa14.46□□□□□ -0.1
HIF3A-201ENST00000244302 RBBP6Q7Z6E9 1792 aaKnown RBP14.46□□□□□ -0.1
HIF3A-201ENST00000244302 RBAK-RBAKDNI3L0D1 243 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 EDNRBP24530 442 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 MORC3Q14149 939 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 IQCB1Q15051 598 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 STXBP2Q15833 593 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 STX1AQ16623 288 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 LY6KQ17RY6 165 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 DNERQ8NFT8 737 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 LARP4BQ92615 738 aaKnown RBP14.45□□□□□ -0.1
HIF3A-201ENST00000244302 ADGRA2Q96PE1 1338 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 GTPBP6O43824 516 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-201ENST00000244302 RPA1P27694 616 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 GCLCP48506 637 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-201ENST00000244302 ARSHQ5FYA8 562 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 HYIQ5T013 277 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 GJC2Q5T442 439 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-201ENST00000244302 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 DHX40Q8IX18 779 aaKnown RBP14.45□□□□□ -0.1
HIF3A-201ENST00000244302 ELOA2Q8IYF1 753 aaPredicted RBP14.45□□□□□ -0.1
HIF3A-201ENST00000244302 GLIS3Q8NEA6 775 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 COPS5Q92905 334 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 TRIM9Q9C026 710 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 USP25Q9UHP3 1055 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 SAMM50Q9Y512 469 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 KIAA1217Q5T5P2 1943 aa14.45□□□□□ -0.1
HIF3A-201ENST00000244302 SPATA31C2B4DYI2 1134 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 EIF3JO75822 258 aaKnown RBP14.44□□□□□ -0.1
HIF3A-201ENST00000244302 RPN1P04843 607 aaKnown RBP14.44□□□□□ -0.1
HIF3A-201ENST00000244302 PLA2G4BP0C869 781 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 KMT5BQ4FZB7 885 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 HSP90AA4PQ58FG1 418 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 KANK3Q6NY19 840 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 C17orf99Q6UX52 265 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 NIPA1Q7RTP0 329 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 TRMT44Q8IYL2 757 aaKnown RBP14.44□□□□□ -0.1
HIF3A-201ENST00000244302 NPLOC4Q8TAT6 608 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 CCDC102AQ96A19 550 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 RIT2Q99578 217 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 ARHGAP39Q9C0H5 1083 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 PDE4DQ08499 809 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 FAM110CQ1W6H9 321 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 ZNF792Q3KQV3 632 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 SV2BQ7L1I2 683 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 MIER3Q7Z3K6 550 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 SHCBP1Q8NEM2 672 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 DDX12PQ92771 950 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 IWS1Q96ST2 819 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 ANO10Q9NW15 660 aa14.44□□□□□ -0.1
HIF3A-201ENST00000244302 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.44□□□□□ -0.1
HIF3A-201ENST00000244302 UQCRHLA0A096LP55 91 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 TLR2O60603 784 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 TPM3P06753 285 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 UQCRHP07919 91 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 SLC12A3P55017 1021 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 STX17P56962 302 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 CCNA1P78396 465 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 PLCB2Q00722 1185 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 DEFB115Q30KQ5 88 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 KLHL10Q6JEL2 608 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 NLRX1Q86UT6 975 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 AOPEPQ8N6M6 819 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 FAM200AQ8TCP9 573 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 GPRASP2Q96D09 838 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 LXNQ9BS40 222 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 FGFBP2Q9BYJ0 223 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 BHMT2Q9H2M3 363 aa14.43□□□□□ -0.1
HIF3A-201ENST00000244302 BMP2KQ9NSY1 1161 aaPredicted RBP14.43□□□□□ -0.1
HIF3A-201ENST00000244302 TM4SF4P48230 202 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 ASIC1P78348 528 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 STK4Q13043 487 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 EPHA7Q15375 998 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 PRAMEF19Q5SWL8 479 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 DNAJC19Q96DA6 116 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 CAPNS2Q96L46 248 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 C7orf25Q9BPX7 421 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 RUSC1Q9BVN2 902 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 TBC1D7Q9P0N9 293 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 ADD3Q9UEY8 706 aaKnown RBP14.42□□□□□ -0.1
HIF3A-201ENST00000244302 SFI1A8K8P3 1242 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 RSPH10B2B2RC85 870 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 ADCY5O95622 1261 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 TBC1D8O95759 1140 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 RSPH10BP0C881 870 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 CYP11B2P19099 503 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 UBA1P22314 1058 aaKnown RBP14.42□□□□□ -0.1
HIF3A-201ENST00000244302 NCAPHQ15003 741 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 UTP14CQ5TAP6 766 aaKnown RBP14.42□□□□□ -0.1
HIF3A-201ENST00000244302 XRRA1Q6P2D8 792 aa14.42□□□□□ -0.1
HIF3A-201ENST00000244302 ARMCX2Q7L311 632 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms