RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 KCNH2Q12809 1159 aa20.39■□□□□ 0.85
CHPF-201ENST00000243776 SPRED3Q2MJR0 410 aa20.39■□□□□ 0.85
CHPF-201ENST00000243776 SPAG5Q96R06 1193 aa20.39■□□□□ 0.85
CHPF-201ENST00000243776 DDX25Q9UHL0 483 aaKnown RBP20.39■□□□□ 0.85
CHPF-201ENST00000243776 DAPK3O43293 454 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 FNTAP49354 379 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 CASP5P51878 434 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 ITGB3BPQ13352 177 aaPredicted RBP20.38■□□□□ 0.85
CHPF-201ENST00000243776 UAP1Q16222 522 aaPredicted RBP20.38■□□□□ 0.85
CHPF-201ENST00000243776 GPBP1Q86WP2 473 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 SUGP1Q8IWZ8 645 aaKnown RBP20.38■□□□□ 0.85
CHPF-201ENST00000243776 HAS1Q92839 578 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 LZTS2Q9BRK4 669 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 IKZF4Q9H2S9 585 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 TNNC1P63316 161 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 QPCTQ16769 361 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 IQCDQ96DY2 449 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 TSKSQ9UJT2 592 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 PHLPP1O60346 1717 aa20.38■□□□□ 0.85
CHPF-201ENST00000243776 F8W031 263 aaPredicted RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 TNFRSF8P28908 595 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 FXR2P51116 673 aaKnown RBP eCLIP20.37■□□□□ 0.85
CHPF-201ENST00000243776 RAB34Q9BZG1 259 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 TAF1DQ9H5J8 278 aaPredicted RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 FBXL5Q9UKA1 691 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 PCDHA12Q9UN75 941 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 GCOM1H8Y6P7 765 aaPredicted RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 SART1O43290 800 aaKnown RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 MYZAPP0CAP1 466 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 ZCWPW2Q504Y3 356 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 SCFD1Q8WVM8 642 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 RIC8AQ9NPQ8 531 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L15C9J2P7 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L13C9JLJ4 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L11C9JVI0 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L18D6R9N7 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L22D6RA61 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L17D6RBQ6 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L19D6RCP7 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L20D6RJB6 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 PDHBP11177 359 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 ACTN3Q08043 901 aaPredicted RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L24Q0WX57 530 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 SEMA3FQ13275 785 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 USP17L6PQ6QN14 398 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 CLEC4GQ6UXB4 293 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 LUC7LQ9NQ29 371 aaKnown RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 BMP2KQ9NSY1 1161 aaPredicted RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 EMILIN3Q9NT22 766 aa20.37■□□□□ 0.85
CHPF-201ENST00000243776 NOVA2Q9UNW9 492 aaKnown RBP20.37■□□□□ 0.85
CHPF-201ENST00000243776 RBAK-RBAKDNI3L0D1 243 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 PRPF4BQ13523 1007 aaKnown RBP20.36■□□□□ 0.85
CHPF-201ENST00000243776 KCTD1Q719H9 257 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 AMIGO3Q86WK7 504 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 NEDD1Q8NHV4 660 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 PCDHGC5Q9Y5F6 944 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 KIAA1551Q9HCM1 1747 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 SMIM23A6NLE4 172 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 KRIT1O00522 736 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 PPP1R11O60927 126 aaPredicted RBP20.36■□□□□ 0.85
CHPF-201ENST00000243776 KIF4AO95239 1232 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 NR2F2P24468 414 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 ECHS1P30084 290 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 COBLL1Q53SF7 1204 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 TRIM59Q8IWR1 403 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 METTL13Q8N6R0 699 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 MDM1Q8TC05 714 aa20.36■□□□□ 0.85
CHPF-201ENST00000243776 CNOT8Q9UFF9 292 aaKnown RBP20.36■□□□□ 0.85
CHPF-201ENST00000243776 AJAP1Q9UKB5 411 aaPredicted RBP20.36■□□□□ 0.85
CHPF-201ENST00000243776 POTEFA5A3E0 1075 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 PLA2G4BP0C869 781 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 POTEIP0CG38 1075 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 POTEGQ6S5H5 508 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 POTEEQ6S8J3 1075 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 CNPY4Q8N129 248 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
CHPF-201ENST00000243776 WDR66Q8TBY9 1149 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 WHAMMQ8TF30 809 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 RUBCNQ92622 972 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 RTFDC1Q9BY42 306 aaPredicted RBP20.35■□□□□ 0.85
CHPF-201ENST00000243776 TMBIM4Q9HC24 238 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 TTI1O43156 1089 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 CABS1Q96KC9 395 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 ZNF844Q08AG5 666 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 TMEM119Q4V9L6 283 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 DPP8Q6V1X1 898 aaPredicted RBP20.35■□□□□ 0.85
CHPF-201ENST00000243776 CYFIP2Q96F07 1278 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 NOC2LQ9Y3T9 749 aaKnown RBP20.35■□□□□ 0.85
CHPF-201ENST00000243776 NR2E1Q9Y466 385 aa20.35■□□□□ 0.85
CHPF-201ENST00000243776 DOT1LQ8TEK3 1739 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 PHF20L1A8MW92 1017 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 CLIC2O15247 247 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 SNAP25P60880 206 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 ALKBH5Q6P6C2 394 aaKnown RBP20.34■□□□□ 0.85
CHPF-201ENST00000243776 CCDC13Q8IYE1 715 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 RNF14Q9UBS8 474 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 HDAC9Q9UKV0 1011 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 SCN7AQ01118 1682 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 AKR1B1P15121 316 aa20.34■□□□□ 0.85
CHPF-201ENST00000243776 PSMC6P62333 389 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms