RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 LGR6Q9HBX8 967 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 NR2F2P24468 414 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 CLCN1P35523 988 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 ZNF827Q17R98 1081 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 SUPT20HL1Q3ZLR7 823 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 THEMIS2Q5TEJ8 643 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 IP6K1Q92551 441 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 MYH3P11055 1940 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 GOLGA8KD6RF30 607 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 PDXDC2PQ6P474 469 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 DDX53Q86TM3 631 aaKnown RBP14.23□□□□□ -0.13
NEK9-201ENST00000238616 KBTBD3Q8NAB2 608 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 EDC3Q96F86 508 aaKnown RBP14.23□□□□□ -0.13
NEK9-201ENST00000238616 MAP10Q9P2G4 905 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 HYOU1Q9Y4L1 999 aa14.23□□□□□ -0.13
NEK9-201ENST00000238616 LRRD1A4D1F6 860 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 ENC1O14682 589 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 NNMTP40261 264 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 TRIML1Q8N9V2 468 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 SENP1Q9P0U3 644 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 OTUD7AQ8TE49 926 aaPredicted RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 CLIC6Q96NY7 704 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 TTI1O43156 1089 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 EFCAB14O75071 495 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 TTLL1O95922 423 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 SUCLG2Q96I99 432 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 CNOT6LQ96LI5 555 aaKnown RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 SPZ1Q9BXG8 430 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 DOLKQ9UPQ8 538 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 ANKRD13CQ8N6S4 541 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 PPP1R36Q96LQ0 422 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 DYRK4Q9NR20 520 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 MYO5CQ9NQX4 1742 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 LBRQ14739 615 aaKnown RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 TCP11Q8WWU5 503 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 MCF2P10911 925 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 HSPA6P17066 643 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 PMS1P54277 932 aaKnown RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 THOC1Q96FV9 657 aaKnown RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 ZNF263O14978 683 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 LRRC23Q53EV4 343 aaPredicted RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 TRIM42Q8IWZ5 723 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 SMYD4Q8IYR2 804 aaPredicted RBP14.22□□□□□ -0.13
NEK9-201ENST00000238616 BCAS4Q8TDM0 211 aa14.22□□□□□ -0.13
NEK9-201ENST00000238616 AOC3Q16853 763 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 KCTD17Q8N5Z5 321 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 L3MBTL1Q9Y468 752 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 HDLBPQ00341 1268 aaKnown RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 UBE3AQ05086 875 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 ZSCAN26Q16670 478 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 TWF2Q6IBS0 349 aaKnown RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 ING2Q9H160 280 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 DNAJC17Q9NVM6 304 aaKnown RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 GOLGA8MH3BSY2 632 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 GFPT2O94808 682 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 PPP6R3Q5H9R7 873 aaPredicted RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 KIAA1755Q5JYT7 1200 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 PASD1Q8IV76 773 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 YAF2Q8IY57 180 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 OR6B3Q8NGW1 331 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 URGCPQ8TCY9 931 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 PSMC2P35998 433 aaKnown RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 LUC7L3O95232 432 aaKnown RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 AFPP02771 609 aaKnown RBP14.21□□□□□ -0.13
NEK9-201ENST00000238616 CENPAP49450 140 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 CCDC90BQ9GZT6 254 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 HEY1Q9Y5J3 304 aa14.21□□□□□ -0.13
NEK9-201ENST00000238616 SUPT3HB4E1H0 165 aa14.21□□□□□ -0.14
NEK9-201ENST00000238616 C16orf87Q6PH81 154 aa14.21□□□□□ -0.14
NEK9-201ENST00000238616 RINLQ6ZS11 566 aa14.21□□□□□ -0.14
NEK9-201ENST00000238616 MED23Q9ULK4 1368 aa14.21□□□□□ -0.14
NEK9-201ENST00000238616 TRIM15Q9C019 465 aa14.21□□□□□ -0.14
NEK9-201ENST00000238616 TRPC7Q9HCX4 862 aa14.21□□□□□ -0.14
NEK9-201ENST00000238616 KPNA2P52292 529 aaKnown RBP14.2□□□□□ -0.14
NEK9-201ENST00000238616 C2orf54Q08AI8 447 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 OR6B2Q6IFH4 312 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 ARMCX2Q7L311 632 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 NOSTRINQ8IVI9 506 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 IFNL3Q8IZI9 196 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 BBOF1Q8ND07 529 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 GTSE1Q9NYZ3 720 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 BPIFB4P59827 614 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 CATSPER3Q86XQ3 398 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 DNAJC10Q8IXB1 793 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 SLC26A7Q8TE54 656 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 SSTR3P32745 418 aaPredicted RBP14.2□□□□□ -0.14
NEK9-201ENST00000238616 SKOR1P84550 965 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 NKX1-1Q15270 411 aaPredicted RBP14.2□□□□□ -0.14
NEK9-201ENST00000238616 SCG2P13521 617 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 LONP1P36776 959 aaKnown RBP14.2□□□□□ -0.14
NEK9-201ENST00000238616 IREB2P48200 963 aaKnown RBP14.2□□□□□ -0.14
NEK9-201ENST00000238616 NDFIP2Q9NV92 336 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 SELENONQ9NZV5 590 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 UBXN8O00124 270 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 PLTPP55058 493 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 NME3Q13232 169 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 HSP90AA5PQ58FG0 334 aa14.2□□□□□ -0.14
NEK9-201ENST00000238616 NAF1Q96HR8 494 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms