RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PSMC6P62333 389 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 SPDYE2Q495Y8 402 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 CCDC40Q4G0X9 1142 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 NCAPH2Q6IBW4 605 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 PDXDC1Q6P996 788 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 EPM2AIP1Q7L775 607 aaPredicted RBP17.88■□□□□ 0.45
UBE3D-201ENST00000237186 TTLL6Q8N841 843 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 MTMR14Q8NCE2 650 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 RANBP17Q9H2T7 1088 aaKnown RBP17.88■□□□□ 0.45
UBE3D-201ENST00000237186 CEP72Q9P209 647 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 ZBTB21Q9ULJ3 1066 aa17.88■□□□□ 0.45
UBE3D-201ENST00000237186 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 LRRC53A6NM62 1247 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 USO1O60763 962 aaKnown RBP17.87■□□□□ 0.45
UBE3D-201ENST00000237186 SEC31AO94979 1220 aaKnown RBP17.87■□□□□ 0.45
UBE3D-201ENST00000237186 KRT18P05783 430 aaKnown RBP17.87■□□□□ 0.45
UBE3D-201ENST00000237186 HOXA13P31271 388 aaPredicted RBP17.87■□□□□ 0.45
UBE3D-201ENST00000237186 DLGAP5Q15398 846 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 KIAA1755Q5JYT7 1200 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 RRAGAQ7L523 313 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 ACER1Q8TDN7 264 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 CHURC1Q8WUH1 139 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 RPGRIP1Q96KN7 1286 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 UIMC1Q96RL1 719 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 PRDM10Q9NQV6 1147 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 TBC1D7Q9P0N9 293 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 TFR2Q9UP52 801 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 PCDHA13Q9Y5I0 950 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 CNTNAP1P78357 1384 aa17.87■□□□□ 0.45
UBE3D-201ENST00000237186 PJA2O43164 708 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 SASH3O75995 380 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 NOL4O94818 638 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 ATP1A1P05023 1023 aaKnown RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 PLEKP08567 350 aaPredicted RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 KIF11P52732 1056 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 CYP27A1Q02318 531 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 CACNB1Q02641 598 aaPredicted RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 ADAM9Q13443 819 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 BMT2Q1RMZ1 405 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 SPICE1Q8N0Z3 855 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 OGFOD1Q8N543 542 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 MSL3Q8N5Y2 521 aaKnown RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 HSD17B14Q9BPX1 270 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 FUT8Q9BYC5 575 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 PDXKO00764 312 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 CETN3O15182 167 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 EYA4O95677 639 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 ZNF76P36508 570 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 EIF4A3P38919 411 aaKnown RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 HGSNATQ68CP4 663 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 CACNA2D4Q7Z3S7 1137 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 FAM83AQ86UY5 434 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 CCDC125Q86Z20 511 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 NELFCDQ8IXH7 590 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 TRIM58Q8NG06 486 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 CYP2W1Q8TAV3 490 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 SECISBP2LQ93073 1101 aaKnown RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 EIF2AK1Q9BQI3 630 aaKnown RBP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 REEP2Q9BRK0 252 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 TANGO6Q9C0B7 1094 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 DEFB129Q9H1M3 183 aa17.86■□□□□ 0.45
UBE3D-201ENST00000237186 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.86■□□□□ 0.45
UBE3D-201ENST00000237186 GCOM1H8Y6P7 765 aaPredicted RBP17.85■□□□□ 0.45
UBE3D-201ENST00000237186 RBAK-RBAKDNI3L0D1 243 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 TFRCP02786 760 aaKnown RBP17.85■□□□□ 0.45
UBE3D-201ENST00000237186 POLR2MP0CAP2 368 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 MUTP22033 750 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 MAP3K10Q02779 954 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 PABPC4Q13310 644 aaKnown RBP eCLIP17.85■□□□□ 0.45
UBE3D-201ENST00000237186 KNOP1Q1ED39 458 aaKnown RBP17.85■□□□□ 0.45
UBE3D-201ENST00000237186 LONRF2Q1L5Z9 754 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 FAM83BQ5T0W9 1011 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 OTOP1Q7RTM1 612 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 KRT26Q7Z3Y9 468 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 FRMD5Q7Z6J6 570 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 TXLNBQ8N3L3 684 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 SMCR8Q8TEV9 937 aaPredicted RBP17.85■□□□□ 0.45
UBE3D-201ENST00000237186 IFIH1Q9BYX4 1025 aaKnown RBP17.85■□□□□ 0.45
UBE3D-201ENST00000237186 VCPKMTQ9H867 229 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 TUFT1Q9NNX1 390 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 DUSP10Q9Y6W6 482 aa17.85■□□□□ 0.45
UBE3D-201ENST00000237186 CLRN2A0PK11 232 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 ENC1O14682 589 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 MAP2K7O14733 419 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 PSMD10O75832 226 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 DPEP1P16444 411 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 PRLRP16471 622 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 HOXD13P35453 343 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 TERF2Q15554 542 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 BEND6Q5SZJ8 279 aaPredicted RBP17.84■□□□□ 0.45
UBE3D-201ENST00000237186 WDR93Q6P2C0 686 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 FAM160B2Q86V87 743 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 CCDC155Q8N6L0 562 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 SLC5A5Q92911 643 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 PNKPQ96T60 521 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 SH2D4AQ9H788 454 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
UBE3D-201ENST00000237186 JRKLQ9Y4A0 524 aa17.84■□□□□ 0.45
UBE3D-201ENST00000237186 EML1O00423 815 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms