RNA–Protein interactions for RNA: ENST00000233025.11

SPCS1-201, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 1,082 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-201ENST00000233025 DGKIO75912 1065 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 BRD1O95696 1058 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 SMIM10L2AP0DMW4 78 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 SMIM10L2BP0DMW5 78 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 FAM26DQ5JW98 314 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 MYSM1Q5VVJ2 828 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 UBALD2Q8IYN6 164 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 KLHL23Q8NBE8 558 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 MAF1Q9H063 256 aa19.27■□□□□ 0.68
SPCS1-201ENST00000233025 MTMR3Q13615 1198 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 USH1GQ495M9 461 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 SIRT2Q8IXJ6 389 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 RMDN3Q96TC7 470 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 NACAP1Q9BZK3 213 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 NAPBQ9H115 298 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 RNPEPQ9H4A4 650 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 SORCS3Q9UPU3 1222 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 GPR179Q6PRD1 2367 aa19.26■□□□□ 0.67
SPCS1-201ENST00000233025 PDHBP11177 359 aa19.25■□□□□ 0.67
SPCS1-201ENST00000233025 SPDYE1Q8NFV5 336 aaPredicted RBP19.25■□□□□ 0.67
SPCS1-201ENST00000233025 S1PR5Q9H228 398 aa19.25■□□□□ 0.67
SPCS1-201ENST00000233025 EIF3JO75822 258 aaKnown RBP19.24■□□□□ 0.67
SPCS1-201ENST00000233025 SP100P23497 879 aaPredicted RBP19.24■□□□□ 0.67
SPCS1-201ENST00000233025 PUM1Q14671 1186 aaKnown RBP eCLIP19.24■□□□□ 0.67
SPCS1-201ENST00000233025 CELF3Q5SZQ8 465 aaKnown RBP19.24■□□□□ 0.67
SPCS1-201ENST00000233025 CMTR2Q8IYT2 770 aaKnown RBP19.24■□□□□ 0.67
SPCS1-201ENST00000233025 SPATA33Q96N06 139 aa19.24■□□□□ 0.67
SPCS1-201ENST00000233025 NEK1Q96PY6 1258 aa19.24■□□□□ 0.67
SPCS1-201ENST00000233025 TMEM47Q9BQJ4 181 aa19.24■□□□□ 0.67
SPCS1-201ENST00000233025 SMOC2Q9H3U7 446 aa19.24■□□□□ 0.67
SPCS1-201ENST00000233025 TLE6Q9H808 572 aa19.24■□□□□ 0.67
SPCS1-201ENST00000233025 EHMT1Q9H9B1 1298 aa19.24■□□□□ 0.67
SPCS1-201ENST00000233025 H3BRB1 525 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 ENPP3O14638 875 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 SORBS3O60504 671 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 CHRNA1P02708 482 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 ZFYP08048 801 aaPredicted RBP19.23■□□□□ 0.67
SPCS1-201ENST00000233025 GHRP10912 638 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 TOP1P11387 765 aaKnown RBP19.23■□□□□ 0.67
SPCS1-201ENST00000233025 EIF2AK2P19525 551 aaKnown RBP19.23■□□□□ 0.67
SPCS1-201ENST00000233025 CLCN5P51795 746 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 CTDSPL2Q05D32 466 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 DUSP6Q16828 381 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 CRIPAKQ8N1N5 446 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 TUT1Q9H6E5 874 aaKnown RBP19.23■□□□□ 0.67
SPCS1-201ENST00000233025 FAM208BQ5VWN6 2430 aa19.23■□□□□ 0.67
SPCS1-201ENST00000233025 DENND4AQ7Z401 1863 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 PER2O15055 1255 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 GGPS1O95749 300 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 LGALS2P05162 132 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 NR3C2P08235 984 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 ADAM17P78536 824 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 KCNC3Q14003 757 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 CWF19L1Q69YN2 538 aaKnown RBP19.22■□□□□ 0.67
SPCS1-201ENST00000233025 LINC01599Q8WXQ3 324 aa19.22■□□□□ 0.67
SPCS1-201ENST00000233025 FSD2A1L4K1 749 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 FOXP2O15409 715 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 RANBP6O60518 1105 aaKnown RBP19.21■□□□□ 0.67
SPCS1-201ENST00000233025 HMMRO75330 724 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 SNHG28P0DPA3 235 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 UBA1P22314 1058 aaKnown RBP19.21■□□□□ 0.67
SPCS1-201ENST00000233025 LPIN1Q14693 890 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 ARHGEF16Q5VV41 709 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 SYCE2Q6PIF2 218 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 TMEM184AQ6ZMB5 413 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 KIAA2013Q8IYS2 634 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 SEC62Q99442 399 aaKnown RBP19.21■□□□□ 0.67
SPCS1-201ENST00000233025 CDCA3Q99618 268 aaPredicted RBP19.21■□□□□ 0.67
SPCS1-201ENST00000233025 PXMP2Q9NR77 195 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 SETD4Q9NVD3 440 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 DLL3Q9NYJ7 618 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 ABCB11O95342 1321 aa19.21■□□□□ 0.67
SPCS1-201ENST00000233025 ORC4O43929 436 aa19.2■□□□□ 0.66
SPCS1-201ENST00000233025 ARP10275 920 aa19.2■□□□□ 0.66
SPCS1-201ENST00000233025 SP2Q02086 613 aa19.2■□□□□ 0.66
SPCS1-201ENST00000233025 ANKRD54Q6NXT1 300 aa19.2■□□□□ 0.66
SPCS1-201ENST00000233025 NR2E1Q9Y466 385 aa19.2■□□□□ 0.66
SPCS1-201ENST00000233025 CCDC171Q6TFL3 1326 aa19.2■□□□□ 0.66
SPCS1-201ENST00000233025 PKD1L2Q7Z442 2459 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 C2CD4DB7Z1M9 353 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 MGAT3Q09327 533 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 ANGPT1Q15389 498 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 CCDC105Q8IYK2 499 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 PIP4P2Q8N4L2 257 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
SPCS1-201ENST00000233025 LMNAP02545 664 aaKnown RBP19.18■□□□□ 0.66
SPCS1-201ENST00000233025 FGRP09769 529 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 GNAT1P11488 350 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 UBE3AQ05086 875 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 PAN2Q504Q3 1202 aaKnown RBP19.18■□□□□ 0.66
SPCS1-201ENST00000233025 KCNV1Q6PIU1 500 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 LMBR1Q8WVP7 490 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 CPVLQ9H3G5 476 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 MFSD1Q9H3U5 465 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 CDH22Q9UJ99 828 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 ANAPC4Q9UJX5 808 aa19.18■□□□□ 0.66
SPCS1-201ENST00000233025 SUPT16HQ9Y5B9 1047 aaKnown RBP19.18■□□□□ 0.66
SPCS1-201ENST00000233025 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms