RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 NEDD1Q8NHV4 660 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 GINM1Q9NU53 330 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 TRIM10Q9UDY6 481 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 GDAQ9Y2T3 454 aa22.75■■□□□ 1.23
SNX3-201ENST00000230085 FAM155AB1AL88 458 aaPredicted RBP22.74■■□□□ 1.23
SNX3-201ENST00000230085 M0R2N6 131 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 EMC10Q5UCC4 262 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 SPRYD7Q5W111 196 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 KIAA1328Q86T90 577 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 SRBD1Q8N5C6 995 aaKnown RBP22.74■■□□□ 1.23
SNX3-201ENST00000230085 WNK4Q96J92 1243 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 IL17RBQ9NRM6 502 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 MAGEC2Q9UBF1 373 aaPredicted RBP22.74■■□□□ 1.23
SNX3-201ENST00000230085 HDAC6Q9UBN7 1215 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 SNX12Q9UMY4 172 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 AFG3L2Q9Y4W6 797 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 PHIPQ8WWQ0 1821 aa22.74■■□□□ 1.23
SNX3-201ENST00000230085 SLC10A3P09131 477 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 GGCXP38435 758 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 SKOR1P84550 965 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 ALS2CLQ60I27 953 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 EMBQ6PCB8 327 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 SIAH1Q8IUQ4 282 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 CEP95Q96GE4 821 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 CCNE1P24864 410 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 SPP2Q13103 211 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 TADA2BQ86TJ2 420 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 PACS2Q86VP3 889 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 C1orf131Q8NDD1 294 aaKnown RBP22.73■■□□□ 1.23
SNX3-201ENST00000230085 CAVIN3Q969G5 261 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 AK8Q96MA6 479 aa22.73■■□□□ 1.23
SNX3-201ENST00000230085 NHEJ1Q9H9Q4 299 aaPredicted RBP22.73■■□□□ 1.23
SNX3-201ENST00000230085 GREB1LQ9C091 1923 aaPredicted RBP22.73■■□□□ 1.23
SNX3-201ENST00000230085 IGKV6D-41A0A0C4DH26 115 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 GOLGA6BA6NDN3 693 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 PHACTR2O75167 634 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 KIF5AQ12840 1032 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 CREG2Q8IUH2 290 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 ZNF280CQ8ND82 737 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 ANKS1AQ92625 1134 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 STAMQ92783 540 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 CAPNS2Q96L46 248 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 DUSP9Q99956 384 aaKnown RBP22.72■■□□□ 1.23
SNX3-201ENST00000230085 TUBGCP2Q9BSJ2 902 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 LACRTQ9GZZ8 138 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 KANSL2Q9H9L4 492 aa22.72■■□□□ 1.23
SNX3-201ENST00000230085 PDE2AO00408 941 aaPredicted RBP22.71■■□□□ 1.23
SNX3-201ENST00000230085 OPA1O60313 960 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ZEB2O60315 1214 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 TCP1P17987 556 aaKnown RBP22.71■■□□□ 1.23
SNX3-201ENST00000230085 KIF5BP33176 963 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ECE1P42892 770 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 NLRP5P59047 1200 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ICA1Q05084 483 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 PPIL2Q13356 520 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 GLE1Q53GS7 698 aaKnown RBP22.71■■□□□ 1.23
SNX3-201ENST00000230085 PIK3AP1Q6ZUJ8 805 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ACER1Q8TDN7 264 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 SECISBP2LQ93073 1101 aaKnown RBP22.71■■□□□ 1.23
SNX3-201ENST00000230085 PLIN4Q96Q06 1357 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 MTMR4Q9NYA4 1195 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 PLAGL2Q9UPG8 496 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 A0A1W2PRG0 241 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 GOLGA6CA6NDK9 693 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ENC1O14682 589 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 PJA2O43164 708 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 GOLGA6DP0CG33 693 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ZBTB48P10074 688 aaPredicted RBP22.71■■□□□ 1.23
SNX3-201ENST00000230085 EEF2P13639 858 aaKnown RBP22.71■■□□□ 1.23
SNX3-201ENST00000230085 IRAK1P51617 712 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ATP2B2Q01814 1243 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 BLIDQ8IZY5 108 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 ZIC5Q96T25 663 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 EDEM3Q9BZQ6 932 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 AS3MTQ9HBK9 375 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 GOLGA6AQ9NYA3 693 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 PCDHA4Q9UN74 947 aa22.71■■□□□ 1.23
SNX3-201ENST00000230085 RCCD1A6NED2 376 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 VEGFBP49765 207 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 PMS1P54277 932 aaKnown RBP22.7■■□□□ 1.22
SNX3-201ENST00000230085 EPHB4P54760 987 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 APBA1Q02410 837 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 SWT1Q5T5J6 900 aaKnown RBP22.7■■□□□ 1.22
SNX3-201ENST00000230085 SPATS2Q86XZ4 545 aaKnown RBP22.7■■□□□ 1.22
SNX3-201ENST00000230085 TRIM47Q96LD4 638 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 PAGR1Q9BTK6 254 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 WDR18Q9BV38 432 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 RNF14Q9UBS8 474 aa22.7■■□□□ 1.22
SNX3-201ENST00000230085 SRRM3A6NNA2 597 aaPredicted RBP22.69■■□□□ 1.22
SNX3-201ENST00000230085 USO1O60763 962 aaKnown RBP22.69■■□□□ 1.22
SNX3-201ENST00000230085 TACC1O75410 805 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 MCM7P33993 719 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 ORC2Q13416 577 aaPredicted RBP22.69■■□□□ 1.22
SNX3-201ENST00000230085 DGKZQ13574 1117 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 DTHD1Q6ZMT9 781 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 P2RX5Q93086 422 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 CCDC47Q96A33 483 aaKnown RBP22.69■■□□□ 1.22
SNX3-201ENST00000230085 SH2D4AQ9H788 454 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 TCP11L1Q9NUJ3 509 aa22.69■■□□□ 1.22
SNX3-201ENST00000230085 STX8Q9UNK0 236 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms