RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 CD2APQ9Y5K6 639 aa15.55■□□□□ 0.08
SHPK-201ENST00000225519 TTI1O43156 1089 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 GHRP10912 638 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 IRX1P78414 480 aaPredicted RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 LRRC63Q05C16 580 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 BIRC2Q13490 618 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 NONOQ15233 471 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHPK-201ENST00000225519 ASTE1Q2TB18 679 aaPredicted RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 ADAT2Q7Z6V5 191 aaKnown RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 DNAAF5Q86Y56 855 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 NELFCDQ8IXH7 590 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 ARMC2Q8NEN0 867 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 CELF4Q9BZC1 486 aaKnown RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 NSRP1Q9H0G5 558 aaKnown RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 VAT1LQ9HCJ6 419 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 STX8Q9UNK0 236 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 COL4A3BPQ9Y5P4 624 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 ADAMTS7Q9UKP4 1686 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 ANP32DO95626 131 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 CHN1P15882 459 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 INTS9Q9NV88 658 aaKnown RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 GGT7Q9UJ14 662 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 STK38LQ9Y2H1 464 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 PCDHGC5Q9Y5F6 944 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 FAM170AA1A519 330 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 HGSO14964 777 aaPredicted RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 CYP2D6P10635 497 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 EVX2Q03828 476 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 UNC13DQ70J99 1090 aa15.54■□□□□ 0.08
SHPK-201ENST00000225519 GUF1Q8N442 669 aaKnown RBP15.54■□□□□ 0.08
SHPK-201ENST00000225519 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHPK-201ENST00000225519 MYMKA6NI61 221 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 H0YGN5 161 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 BRD2P25440 801 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 GNAQP50148 359 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 TFAP4Q01664 338 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 MYOCDQ8IZQ8 938 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 FMO2Q99518 471 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.53■□□□□ 0.086e-7■■□□□ 13.8
SHPK-201ENST00000225519 CRNKL1Q9BZJ0 848 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 SPATS2LQ9NUQ6 558 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 NOP53Q9NZM5 478 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 NFS1Q9Y697 457 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 PHRF1Q9P1Y6 1649 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 RGS16O15492 202 aaPredicted RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 CDC25CP30307 473 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 SLC8A3P57103 927 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 TMEM266Q2M3C6 531 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 LARP4BQ92615 738 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 BRIP1Q9BX63 1249 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 SH3GLB2Q9NR46 395 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 C5orf60A6NFR6 353 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 TLR2O60603 784 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 PCP11498 1178 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 ITGA4P13612 1032 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 PRPHP41219 470 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 FKBP3Q00688 224 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 DZIP3Q86Y13 1208 aaKnown RBP15.53■□□□□ 0.08
SHPK-201ENST00000225519 MKNK2Q9HBH9 465 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 FAM114A2Q9NRY5 505 aa15.53■□□□□ 0.08
SHPK-201ENST00000225519 CCDC188H7C350 402 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 DIAPH2O60879 1101 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 CAND2O75155 1236 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 GOLGA8HP0CJ92 632 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 USP11P51784 963 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 CCNHP51946 323 aaPredicted RBP15.52■□□□□ 0.08
SHPK-201ENST00000225519 KCNMA1Q12791 1236 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 DENND2CQ68D51 928 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 FAM129AQ9BZQ8 928 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 BYSLQ13895 437 aaKnown RBP15.52■□□□□ 0.08
SHPK-201ENST00000225519 RCSD1Q6JBY9 416 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 KRT25Q7Z3Z0 450 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 TMC3Q7Z5M5 1100 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 LMBR1Q8WVP7 490 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 TRIM51Q9BSJ1 452 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 BATF3Q9NR55 127 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 BMP2KQ9NSY1 1161 aaPredicted RBP15.52■□□□□ 0.08
SHPK-201ENST00000225519 MCM9Q9NXL9 1143 aa15.52■□□□□ 0.08
SHPK-201ENST00000225519 F8VZ95 297 aa15.52■□□□□ 0.07
SHPK-201ENST00000225519 TMED8Q6PL24 325 aaPredicted RBP15.52■□□□□ 0.07
SHPK-201ENST00000225519 LRRC34Q8IZ02 419 aa15.52■□□□□ 0.07
SHPK-201ENST00000225519 METTL13Q8N6R0 699 aa15.52■□□□□ 0.07
SHPK-201ENST00000225519 C15orf41Q9Y2V0 281 aa15.52■□□□□ 0.07
SHPK-201ENST00000225519 EIF3BP55884 814 aaKnown RBP15.51■□□□□ 0.07
SHPK-201ENST00000225519 CHRNDQ07001 517 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 CAVIN4Q5BKX8 364 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 CAPRIN2Q6IMN6 1127 aaKnown RBP15.51■□□□□ 0.07
SHPK-201ENST00000225519 TLDC1Q6P9B6 456 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 NEK8Q86SG6 692 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 SNX29Q8TEQ0 813 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 RIOK1Q9BRS2 568 aaKnown RBP15.51■□□□□ 0.07
SHPK-201ENST00000225519 CPVLQ9H3G5 476 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 KIF9Q9HAQ2 790 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 PPIP5K2O43314 1243 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 CCDC152Q4G0S7 254 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 TRPM8Q7Z2W7 1104 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 VPS36Q86VN1 386 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 CCHCR1Q8TD31 782 aa15.51■□□□□ 0.07
SHPK-201ENST00000225519 C6orf50Q9HD87 102 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms