RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 SCN10AQ9Y5Y9 1956 aa16.31■□□□□ 0.2
SUPT4H1-201ENST00000225504 H3BRB1 525 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 PSMD10O75832 226 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 ATG7O95352 703 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 F2P00734 622 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 SYT1P21579 422 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 FAAP100Q0VG06 881 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 HIC1Q14526 733 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 NBR1Q14596 966 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 MFSD10Q14728 455 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 ZNF174Q15697 407 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 KIAA0753Q2KHM9 967 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 ABHD15Q6UXT9 468 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 ANKRD33Q7Z3H0 272 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 RNPEPQ9H4A4 650 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 TUT1Q9H6E5 874 aaKnown RBP16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 KCNMB3Q9NPA1 279 aa16.3■□□□□ 0.2
SUPT4H1-201ENST00000225504 H0YGN5 161 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 GCFC2P16383 781 aaKnown RBP16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 SYN1P17600 705 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 FAM47CQ5HY64 1035 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 FAM126BQ8IXS8 530 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 RIT2Q99578 217 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 TMEM60Q9H2L4 133 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 UNC45AQ9H3U1 944 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 HDAC6Q9UBN7 1215 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 ZMYND8Q9ULU4 1186 aaPredicted RBP16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 PDE4DIPQ5VU43 2346 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 GAS7O60861 476 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 LGR5O75473 907 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 CD4P01730 458 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 MCM7P33993 719 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 TOX2Q96NM4 488 aa16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 NAP1L4Q99733 375 aaKnown RBP16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 TRMT13Q9NUP7 481 aaKnown RBP16.29■□□□□ 0.2
SUPT4H1-201ENST00000225504 IGKV6D-21A0A0A0MT36 114 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 TRIM43BA6NCK2 446 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 CHMP2AO43633 222 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 B4GALT4O60513 344 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 ZNF200P98182 395 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 TTC38Q5R3I4 469 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 GDF6Q6KF10 455 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 SWSAP1Q6NVH7 229 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 NFRKBQ6P4R8 1299 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 B3GNT9Q6UX72 402 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 FERMT3Q86UX7 667 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 GLG1Q92896 1179 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 TRIM43Q96BQ3 446 aaPredicted RBP16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 FAM20AQ96MK3 541 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 CTAGE1Q96RT6 745 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 TEKT3Q9BXF9 490 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 PDLIM7Q9NR12 457 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 PCDHB6Q9Y5E3 794 aa16.28■□□□□ 0.2
SUPT4H1-201ENST00000225504 DCDC2CA8MYV0 355 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 RBAK-RBAKDNI3L0D1 243 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 EML1O00423 815 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 SUPT20HL2P0C7V6 817 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 ITGB8P26012 769 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 MARK3P27448 753 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 KRT76Q01546 638 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 ZNF746Q6NUN9 644 aaPredicted RBP16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 CCDC60Q8IWA6 550 aaPredicted RBP16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 C7orf31Q8N865 590 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 MTMR9Q96QG7 549 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 SMARCAD1Q9H4L7 1026 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 VAV3Q9UKW4 847 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 NR2E3Q9Y5X4 410 aa16.27■□□□□ 0.19
SUPT4H1-201ENST00000225504 TBX3O15119 743 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 MARCH6O60337 910 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 NEMFO60524 1076 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 CLTBP09497 229 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 SMIM10L2AP0DMW4 78 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 SMIM10L2BP0DMW5 78 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 ATP4AP20648 1035 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 PDCP20941 246 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 STAT5BP51692 787 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 MIS18BP1Q6P0N0 1132 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 C4orf32Q8N8J7 132 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 KATNAL1Q9BW62 490 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 PRDM5Q9NQX1 630 aaPredicted RBP16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 DISC1Q9NRI5 854 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 TMEM39AQ9NV64 488 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 MTMR6Q9Y217 621 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 PCDHA10Q9Y5I2 948 aa16.26■□□□□ 0.19
SUPT4H1-201ENST00000225504 EMSYQ7Z589 1322 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 BACH1O14867 736 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 HSP90AA1P07900 732 aaKnown RBP16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 CYP2C9P11712 490 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 TXKP42681 527 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 CALCRLQ16602 461 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 UGCGQ16739 394 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 PLPPR4Q7Z2D5 763 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 AZI2Q9H6S1 392 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 SETD4Q9NVD3 440 aa16.25■□□□□ 0.19
SUPT4H1-201ENST00000225504 GTF2IRD1Q9UHL9 959 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms