RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.17■□□□□ 0.5
EBI3-201ENST00000221847 H3BRB1 525 aa18.16■□□□□ 0.5
EBI3-201ENST00000221847 B4GALT4O60513 344 aa18.16■□□□□ 0.5
EBI3-201ENST00000221847 GJA10Q969M2 543 aa18.16■□□□□ 0.5
EBI3-201ENST00000221847 TUT1Q9H6E5 874 aaKnown RBP18.16■□□□□ 0.5
EBI3-201ENST00000221847 TBC1D22BQ9NU19 505 aa18.16■□□□□ 0.5
EBI3-201ENST00000221847 TRMT13Q9NUP7 481 aaKnown RBP18.16■□□□□ 0.5
EBI3-201ENST00000221847 HDAC6Q9UBN7 1215 aa18.16■□□□□ 0.5
EBI3-201ENST00000221847 PRKAG2Q9UGJ0 569 aa18.16■□□□□ 0.5
EBI3-201ENST00000221847 DDX25Q9UHL0 483 aaKnown RBP18.16■□□□□ 0.5
EBI3-201ENST00000221847 KIAA0355O15063 1070 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 SLC37A4O43826 429 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 CCNT1O60563 726 aaKnown RBP18.15■□□□□ 0.5
EBI3-201ENST00000221847 PTPN11Q06124 597 aaPredicted RBP18.15■□□□□ 0.5
EBI3-201ENST00000221847 PPP4R3AQ6IN85 833 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 C7orf31Q8N865 590 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 SLC5A5Q92911 643 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 PCYT2Q99447 389 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 TBX21Q9UL17 535 aa18.15■□□□□ 0.5
EBI3-201ENST00000221847 K7ELQ4 463 aaPredicted RBP18.14■□□□□ 0.49
EBI3-201ENST00000221847 LGR5O75473 907 aa18.14■□□□□ 0.49
EBI3-201ENST00000221847 GCFC2P16383 781 aaKnown RBP18.14■□□□□ 0.49
EBI3-201ENST00000221847 ITGB8P26012 769 aa18.14■□□□□ 0.49
EBI3-201ENST00000221847 GDF6Q6KF10 455 aaPredicted RBP18.14■□□□□ 0.49
EBI3-201ENST00000221847 SESTD1Q86VW0 696 aa18.14■□□□□ 0.49
EBI3-201ENST00000221847 ETNPPLQ8TBG4 499 aa18.14■□□□□ 0.49
EBI3-201ENST00000221847 GLG1Q92896 1179 aa18.14■□□□□ 0.49
EBI3-201ENST00000221847 SNX21Q969T3 373 aa18.14■□□□□ 0.49
EBI3-201ENST00000221847 FOXP1Q9H334 677 aaPredicted RBP18.14■□□□□ 0.49
EBI3-201ENST00000221847 KIF28PB7ZC32 967 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 WNT7AO00755 349 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 GAS7O60861 476 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 ATG7O95352 703 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 MAGEA10P43363 369 aaPredicted RBP18.13■□□□□ 0.49
EBI3-201ENST00000221847 MDM2Q00987 491 aaPredicted RBP18.13■□□□□ 0.49
EBI3-201ENST00000221847 GNL2Q13823 731 aaKnown RBP18.13■□□□□ 0.49
EBI3-201ENST00000221847 LRCH2Q5VUJ6 765 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 ABHD15Q6UXT9 468 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 RIT2Q99578 217 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 NAP1L4Q99733 375 aaKnown RBP18.13■□□□□ 0.49
EBI3-201ENST00000221847 RNPEPQ9H4A4 650 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 SMARCAD1Q9H4L7 1026 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 GTF2IRD1Q9UHL9 959 aa18.13■□□□□ 0.49
EBI3-201ENST00000221847 ZNF215Q9UL58 517 aaPredicted RBP18.13■□□□□ 0.49
EBI3-201ENST00000221847 PSMD10O75832 226 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 SUPT20HL2P0C7V6 817 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 SMIM10L2AP0DMW4 78 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 SMIM10L2BP0DMW5 78 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 CYP2C9P11712 490 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 RAG1P15918 1043 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 ATP2B1P20020 1258 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 MARK3P27448 753 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 ZNF200P98182 395 aaPredicted RBP18.12■□□□□ 0.49
EBI3-201ENST00000221847 KRT76Q01546 638 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 HIC1Q14526 733 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 PTGISQ16647 500 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 ZNF746Q6NUN9 644 aaPredicted RBP18.12■□□□□ 0.49
EBI3-201ENST00000221847 NOSTRINQ8IVI9 506 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 BADQ92934 168 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 LBHD1Q9BQE6 289 aaPredicted RBP18.12■□□□□ 0.49
EBI3-201ENST00000221847 TEKT3Q9BXF9 490 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 PPP1R12CQ9BZL4 782 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 AZI2Q9H6S1 392 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 FOXD4L1Q9NU39 408 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 EMSYQ7Z589 1322 aa18.12■□□□□ 0.49
EBI3-201ENST00000221847 IGKV6D-21A0A0A0MT36 114 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 H3BQV1 296 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 TIMP1P01033 207 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 U2AF2P26368 475 aaKnown RBP eCLIP18.11■□□□□ 0.49
EBI3-201ENST00000221847 LARP1BQ659C4 914 aaKnown RBP18.11■□□□□ 0.49
EBI3-201ENST00000221847 MCTP1Q6DN14 999 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 MIS18BP1Q6P0N0 1132 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 CHRDL2Q6WN34 429 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 POTEDQ86YR6 584 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 CTAGE1Q96RT6 745 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 GDF15Q99988 308 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 UNC45AQ9H3U1 944 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 KCNMB3Q9NPA1 279 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 ERAP1Q9NZ08 941 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 TCEAL9Q9UHQ7 104 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 NOD1Q9Y239 953 aa18.11■□□□□ 0.49
EBI3-201ENST00000221847 UMODL1Q5DID0 1318 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 BACH1O14867 736 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 CHMP2AO43633 222 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 CYP2C18P33260 490 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 STAT5BP51692 787 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 SWSAP1Q6NVH7 229 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 PLPPR4Q7Z2D5 763 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
EBI3-201ENST00000221847 HSCBQ8IWL3 235 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 SMAP1Q8IYB5 467 aaPredicted RBP18.1■□□□□ 0.49
EBI3-201ENST00000221847 HAS1Q92839 578 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 FAM20AQ96MK3 541 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 NOC4LQ9BVI4 516 aaKnown RBP18.1■□□□□ 0.49
EBI3-201ENST00000221847 HIPK3Q9H422 1215 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 SETD4Q9NVD3 440 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 SAMM50Q9Y512 469 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 PCDHA10Q9Y5I2 948 aa18.1■□□□□ 0.49
EBI3-201ENST00000221847 C17orf102A2RUQ5 167 aa18.09■□□□□ 0.49
EBI3-201ENST00000221847 WDR64B1ANS9 1081 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms