RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 E9PMD0 336 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 SRGAP2CP0DJJ0 459 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 ADAM9Q13443 819 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 VGLL4Q14135 290 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 POMGNT1Q8WZA1 660 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 PPP1R9BQ96SB3 815 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 SH2D3AQ9BRG2 576 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 GABBR1Q9UBS5 961 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
CCDC113-201ENST00000219299 LRRC37A3O60309 1634 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 PRELPP51888 382 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 KIAA1683Q9H0B3 1180 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 KMT5AQ9NQR1 393 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 FANCLQ9NW38 375 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 POTEFA5A3E0 1075 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 SLC25A27O95847 323 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 DLATP10515 647 aaKnown RBP10.32□□□□□ -0.76
CCDC113-201ENST00000219299 PPP2R5AQ15172 486 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 DPCR1Q3MIW9 517 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 POTEGQ6S5H5 508 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 POTEEQ6S8J3 1075 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 AFAP1L1Q8TED9 768 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 DYDC2Q96IM9 177 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 NLRP4Q96MN2 994 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 H0YCG3 227 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 KRT5P13647 590 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 PTPRAP18433 802 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 KIAA0753Q2KHM9 967 aa10.32□□□□□ -0.76
CCDC113-201ENST00000219299 ASTN2O75129 1339 aaPredicted RBP10.32□□□□□ -0.76
CCDC113-201ENST00000219299 ICAM1P05362 532 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 XRCC5P13010 732 aaKnown RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 JAK3P52333 1124 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 SREBF2Q12772 1141 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 FMNL3Q8IVF7 1028 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 SELENOOQ9BVL4 669 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 PARVGQ9HBI0 331 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 RGL1Q9NZL6 768 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 MYL3P08590 195 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 TAL1P17542 331 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 QARSP47897 775 aaKnown RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 DNAJC21Q5F1R6 531 aaKnown RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 PAGE5Q96GU1 130 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 SPATA33Q96N06 139 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 APOL6Q9BWW8 343 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 FAM207AQ9NSI2 230 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 IRF6O14896 467 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 GGPS1O95749 300 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 RHOXF2BP0C7M4 288 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 PRPF4BQ13523 1007 aaKnown RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 ZNF569Q5MCW4 686 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 MFSD14CQ5VZR4 134 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 CTNNBL1Q8WYA6 563 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 TAAR1Q96RJ0 339 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 RHOXF2Q9BQY4 288 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 CPA4Q9UI42 421 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 RGPD1P0DJD0 1748 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 CXCL11O14625 94 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 ZEB2O60315 1214 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 VAV2P52735 878 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 ATP2C1P98194 919 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 NFX1Q12986 1120 aaKnown RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 MORC3Q14149 939 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 TFDP1Q14186 410 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 CYFIP1Q7L576 1253 aa10.31□□□□□ -0.76
CCDC113-201ENST00000219299 GIMAP8Q8ND71 665 aaPredicted RBP10.31□□□□□ -0.76
CCDC113-201ENST00000219299 P4HBP07237 508 aaKnown RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 PEX3P56589 373 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 KIF5AQ12840 1032 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 LRMPQ12912 555 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 CPLX4Q7Z7G2 160 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 RSPH3Q86UC2 560 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 HACE1Q8IYU2 909 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 GMCL1P1Q8NEA9 526 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 CHST13Q8NET6 341 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 AGXT2Q9BYV1 514 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 TAF1DQ9H5J8 278 aaPredicted RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 NLRC4Q9NPP4 1024 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 PCDHA10Q9Y5I2 948 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 DDIT3P35638 169 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 ELF2Q15723 593 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 NTRK3Q16288 839 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 TKFCQ3LXA3 575 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 RESP18Q5W5W9 173 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 ZNF668Q96K58 619 aaPredicted RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 CPSF2Q9P2I0 782 aaKnown RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 MKRN1Q9UHC7 482 aaKnown RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 DOT1LQ8TEK3 1739 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 NFIBO00712 420 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 CLIC2O15247 247 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 DYNC1LI2O43237 492 aaPredicted RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 PGK2P07205 417 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 NR2F2P24468 414 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 KRT9P35527 623 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 HERVK_113P62684 666 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 NAA25Q14CX7 972 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 ZC3H15Q8WU90 426 aaKnown RBP10.3□□□□□ -0.76
CCDC113-201ENST00000219299 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
CCDC113-201ENST00000219299 SCN11AQ9UI33 1791 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms