RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 STX8Q9UNK0 236 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 FLT1P17948 1338 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 TBC1D9BQ66K14 1250 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 HIBCHQ6NVY1 386 aaPredicted RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 FAM133AQ8N9E0 248 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MIEF2Q96C03 454 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 TBC1D31Q96DN5 1066 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 PACSIN1Q9BY11 444 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 DDX47Q9H0S4 455 aaKnown RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MKNK2Q9HBH9 465 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 SWAP70Q9UH65 585 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MYH2Q9UKX2 1941 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 A0A087X0T9 212 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MYMKA6NI61 221 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 KRIT1O00522 736 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 SART1O43290 800 aaKnown RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 RPS6KA4O75676 772 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 NEBLO76041 1014 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 FAM228BP0C875 321 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 GCFC2P16383 781 aaKnown RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 SLC18A3Q16572 532 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 IFI16Q16666 785 aaKnown RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 TRAPPC3LQ5T215 181 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 NEK8Q86SG6 692 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 GOLPH3Q9H4A6 298 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 DCP1AQ9NPI6 582 aaPredicted RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MARCH6O60337 910 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 FGRP09769 529 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 TMEM266Q2M3C6 531 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 WLSQ5T9L3 541 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 TMED8Q6PL24 325 aaPredicted RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 MYOCDQ8IZQ8 938 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 ANKS4BQ8N8V4 417 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 ANKS1AQ92625 1134 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 TRIM31Q9BZY9 425 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 DPH5Q9H2P9 285 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 C6orf50Q9HD87 102 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 SLC12A6Q9UHW9 1150 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PCDHGC5Q9Y5F6 944 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 COL4A3BPQ9Y5P4 624 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 ABCB11O95342 1321 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 MYH14Q7Z406 1995 aaKnown RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PVALEFA0A1B0GWK0 134 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 ERVV-1B6SEH8 477 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PGRMC1O00264 195 aaKnown RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 GOLGA8HP0CJ92 632 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 FKBP3Q00688 224 aaKnown RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 DHX9Q08211 1270 aaKnown RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PPP2R5AQ15172 486 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 SPRED3Q2MJR0 410 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PNMA8AQ86V59 439 aaPredicted RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PBKQ96KB5 322 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 SPAG5Q96R06 1193 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 SELENOSQ9BQE4 189 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 KANSL2Q9H9L4 492 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 VAT1LQ9HCJ6 419 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 BARHL2Q9NY43 387 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 SMCO2A6NFE2 343 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 DAPK3O43293 454 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 PPP1R12BO60237 982 aaPredicted RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 BUB1BO60566 1050 aaPredicted RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 CTNND1O60716 968 aaKnown RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 KIF4AO95239 1232 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 KCNMA1Q12791 1236 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 AGBL2Q5U5Z8 902 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 ZNF34Q8IZ26 560 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 CCDC197Q8NCU1 140 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 CCDC26Q8TAB7 109 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 RSRC1Q96IZ7 334 aaKnown RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 GOPCQ9HD26 462 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 RIC8AQ9NPQ8 531 aa10.59□□□□□ -0.71
TUBB1-201ENST00000217133 ARPP21Q9UBL0 812 aaPredicted RBP10.59□□□□□ -0.71
TUBB1-201ENST00000217133 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 UBR2Q8IWV8 1755 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 TLDC2A0PJX2 215 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 RBAK-RBAKDNI3L0D1 243 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 OPLAHO14841 1288 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 TLR2O60603 784 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 GNA11P29992 359 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 UAP1Q16222 522 aaPredicted RBP10.58□□□□□ -0.72
TUBB1-201ENST00000217133 KCTD19Q17RG1 926 aaPredicted RBP10.58□□□□□ -0.72
TUBB1-201ENST00000217133 RCSD1Q6JBY9 416 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 P3H4Q92791 437 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 RAB34Q9BZG1 259 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 CNOT8Q9UFF9 292 aaKnown RBP10.58□□□□□ -0.72
TUBB1-201ENST00000217133 AMACRQ9UHK6 382 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 STXBP3O00186 592 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 TSPY3P0CV98 308 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 TSPY8P0CW00 308 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 NBPF9Q3BBW0 867 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 LRRC55Q6ZSA7 311 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 PEX26Q7Z412 305 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 NELFCDQ8IXH7 590 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 TEX11Q8IYF3 940 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 DAGLBQ8NCG7 672 aa10.58□□□□□ -0.72
TUBB1-201ENST00000217133 SNX29Q8TEQ0 813 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms