RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 NDST4Q9H3R1 872 aa32.92■■■□□ 2.86
PABPN1-201ENST00000216727 RAVER2Q9HCJ3 691 aaKnown RBP32.92■■■□□ 2.86
PABPN1-201ENST00000216727 DNAI1Q9UI46 699 aa32.92■■■□□ 2.86
PABPN1-201ENST00000216727 ARP10275 920 aa32.91■■■□□ 2.86
PABPN1-201ENST00000216727 RAD51AP2Q09MP3 1159 aa32.91■■■□□ 2.86
PABPN1-201ENST00000216727 CPXCR1Q8N123 301 aa32.91■■■□□ 2.86
PABPN1-201ENST00000216727 TSC1Q92574 1164 aa32.91■■■□□ 2.86
PABPN1-201ENST00000216727 KCTD10Q9H3F6 313 aa32.91■■■□□ 2.86
PABPN1-201ENST00000216727 NKRFO15226 690 aaKnown RBP eCLIP32.9■■■□□ 2.86
PABPN1-201ENST00000216727 ALAS1P13196 640 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 PPP4R3CPQ6ZMV5 832 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 GPC2Q8N158 579 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 ZNF280CQ8ND82 737 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 WRNIP1Q96S55 665 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 PICK1Q9NRD5 415 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 PPP2R3BQ9Y5P8 575 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 RBBP6Q7Z6E9 1792 aaKnown RBP32.9■■■□□ 2.86
PABPN1-201ENST00000216727 RASSF10A6NK89 507 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 ZBED4O75132 1171 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 PTPRAP18433 802 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 TRIM21P19474 475 aaKnown RBP32.9■■■□□ 2.86
PABPN1-201ENST00000216727 TRPM4Q8TD43 1214 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 TEKT3Q9BXF9 490 aa32.9■■■□□ 2.86
PABPN1-201ENST00000216727 MRPL44Q9H9J2 332 aaKnown RBP32.9■■■□□ 2.86
PABPN1-201ENST00000216727 FRMPD4Q14CM0 1322 aa32.89■■■□□ 2.86
PABPN1-201ENST00000216727 A0A1W2PQJ5 194 aa32.89■■■□□ 2.86
PABPN1-201ENST00000216727 IPO5O00410 1097 aaKnown RBP32.89■■■□□ 2.86
PABPN1-201ENST00000216727 ZC3H3Q8IXZ2 948 aaKnown RBP32.89■■■□□ 2.86
PABPN1-201ENST00000216727 DYDC2Q96IM9 177 aa32.89■■■□□ 2.86
PABPN1-201ENST00000216727 COL4A3BPQ9Y5P4 624 aa32.89■■■□□ 2.86
PABPN1-201ENST00000216727 GNA14O95837 355 aa32.89■■■□□ 2.85
PABPN1-201ENST00000216727 ITGB5P18084 799 aa32.89■■■□□ 2.85
PABPN1-201ENST00000216727 CTTNQ14247 550 aaKnown RBP32.89■■■□□ 2.85
PABPN1-201ENST00000216727 EPHA7Q15375 998 aa32.89■■■□□ 2.85
PABPN1-201ENST00000216727 TRAF5O00463 557 aa32.88■■■□□ 2.85
PABPN1-201ENST00000216727 TSR1Q2NL82 804 aaKnown RBP32.88■■■□□ 2.85
PABPN1-201ENST00000216727 EDRF1Q3B7T1 1238 aa32.88■■■□□ 2.85
PABPN1-201ENST00000216727 SYTL5Q8TDW5 730 aaPredicted RBP32.88■■■□□ 2.85
PABPN1-201ENST00000216727 ZKSCAN4Q969J2 545 aaPredicted RBP32.88■■■□□ 2.85
PABPN1-201ENST00000216727 C12orf42Q96LP6 360 aa32.88■■■□□ 2.85
PABPN1-201ENST00000216727 ZHX3Q9H4I2 956 aa32.88■■■□□ 2.85
PABPN1-201ENST00000216727 CHMP2AO43633 222 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 ZBED6P86452 979 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 MEA1Q16626 185 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 PCNX4Q63HM2 1172 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 EPM2AIP1Q7L775 607 aaPredicted RBP32.87■■■□□ 2.85
PABPN1-201ENST00000216727 TPH2Q8IWU9 490 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 RUSC1Q9BVN2 902 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 UNC45AQ9H3U1 944 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 CTDP1Q9Y5B0 961 aaPredicted RBP32.87■■■□□ 2.85
PABPN1-201ENST00000216727 PARP14Q460N5 1801 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 LMNB1P20700 586 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 MARSP56192 900 aaKnown RBP32.87■■■□□ 2.85
PABPN1-201ENST00000216727 MUM1L1Q5H9M0 696 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 RINT1Q6NUQ1 792 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 SLC30A10Q6XR72 485 aa32.87■■■□□ 2.85
PABPN1-201ENST00000216727 DICER1Q9UPY3 1922 aaKnown RBP32.87■■■□□ 2.85
PABPN1-201ENST00000216727 VWA5AO00534 786 aa32.86■■■□□ 2.85
PABPN1-201ENST00000216727 SFR1Q86XK3 245 aa32.86■■■□□ 2.85
PABPN1-201ENST00000216727 NELFCDQ8IXH7 590 aa32.86■■■□□ 2.85
PABPN1-201ENST00000216727 SIK3Q9Y2K2 1263 aa32.86■■■□□ 2.85
PABPN1-201ENST00000216727 FANCGO15287 622 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 NEK9Q8TD19 979 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 ZFP91Q96JP5 570 aaPredicted RBP32.85■■■□□ 2.85
PABPN1-201ENST00000216727 NACC1Q96RE7 527 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 GGA3Q9NZ52 723 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 UBIAD1Q9Y5Z9 338 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 SLU7O95391 586 aaKnown RBP32.85■■■□□ 2.85
PABPN1-201ENST00000216727 GAP43P17677 238 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 KLK7P49862 253 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 GNG11P61952 73 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 KLRG1Q96E93 195 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 KCNH7Q9NS40 1196 aa32.85■■■□□ 2.85
PABPN1-201ENST00000216727 C19orf81C9J6K1 198 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 TBCAO75347 108 aaKnown RBP32.84■■■□□ 2.85
PABPN1-201ENST00000216727 RBM10P98175 930 aaKnown RBP32.84■■■□□ 2.85
PABPN1-201ENST00000216727 BMT2Q1RMZ1 405 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 PRAMEF18Q5VWM3 479 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 WDR59Q6PJI9 974 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 IL31RAQ8NI17 732 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 PIGOQ8TEQ8 1089 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 PCMTD1Q96MG8 357 aaPredicted RBP32.84■■■□□ 2.85
PABPN1-201ENST00000216727 CHP1Q99653 195 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 OLFML3Q9NRN5 406 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 AGPAT5Q9NUQ2 364 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 TRAF3IP3Q9Y228 551 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 CASP5P51878 434 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 RPS6P62753 249 aaKnown RBP32.84■■■□□ 2.85
PABPN1-201ENST00000216727 C1orf186Q6ZWK4 172 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 ZNF710Q8N1W2 664 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 ZNF397Q8NF99 534 aaPredicted RBP32.84■■■□□ 2.85
PABPN1-201ENST00000216727 HOMER2Q9NSB8 354 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 KCND2Q9NZV8 630 aa32.84■■■□□ 2.85
PABPN1-201ENST00000216727 ERO1AQ96HE7 468 aa32.83■■■□□ 2.85
PABPN1-201ENST00000216727 TRERF1Q96PN7 1200 aa32.83■■■□□ 2.85
PABPN1-201ENST00000216727 JADE2Q9NQC1 790 aa32.83■■■□□ 2.85
PABPN1-201ENST00000216727 ZNF215Q9UL58 517 aaPredicted RBP32.83■■■□□ 2.85
PABPN1-201ENST00000216727 EPN1Q9Y6I3 576 aaPredicted RBP32.83■■■□□ 2.85
PABPN1-201ENST00000216727 KNOP1Q1ED39 458 aaKnown RBP32.82■■■□□ 2.84
PABPN1-201ENST00000216727 TKFCQ3LXA3 575 aa32.82■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms