RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 RNF146Q9NTX7 359 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 RGL1Q9NZL6 768 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 ADAMTS5Q9UNA0 930 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 AFG3L2Q9Y4W6 797 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 MYPNQ86TC9 1320 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 NPHP3-ACAD11A0A0J9YXS1 232 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 PPP1R12BO60237 982 aaPredicted RBP19.31■□□□□ 0.68
VRK1-201ENST00000216639 TBCAO75347 108 aaKnown RBP19.31■□□□□ 0.68
VRK1-201ENST00000216639 SLITRK3O94933 977 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 GYPCP04921 128 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 MAP3K9P80192 1104 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 CTTNQ14247 550 aaKnown RBP19.31■□□□□ 0.68
VRK1-201ENST00000216639 FKBP15Q5T1M5 1219 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 NSMFQ6X4W1 530 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 CATSPERGQ6ZRH7 1159 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 ZNF507Q8TCN5 953 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 NACC1Q96RE7 527 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 MAF1Q9H063 256 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 UNC45AQ9H3U1 944 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 JADE2Q9NQC1 790 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 KCNH7Q9NS40 1196 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 HOXC10Q9NYD6 342 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 PCDHA2Q9Y5H9 948 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 UBIAD1Q9Y5Z9 338 aa19.31■□□□□ 0.68
VRK1-201ENST00000216639 PARP14Q460N5 1801 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 PHIPQ8WWQ0 1821 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 FKBP3Q00688 224 aaKnown RBP19.3■□□□□ 0.68
VRK1-201ENST00000216639 RAD51AP2Q09MP3 1159 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 PRKG1Q13976 671 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 TKFCQ3LXA3 575 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 SH3D19Q5HYK7 790 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 SNRNP48Q6IEG0 339 aaKnown RBP19.3■□□□□ 0.68
VRK1-201ENST00000216639 XRRA1Q6P2D8 792 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 ZFP91Q96JP5 570 aaPredicted RBP19.3■□□□□ 0.68
VRK1-201ENST00000216639 TAAR1Q96RJ0 339 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 REEP2Q9BRK0 252 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 NUP58Q9BVL2 599 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 TBC1D7Q9P0N9 293 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 CSADQ9Y600 493 aa19.3■□□□□ 0.68
VRK1-201ENST00000216639 GOLGA6L9A6NEM1 432 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 B4DLN1 442 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 ATP2A1O14983 1001 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 GAP43P17677 238 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
VRK1-201ENST00000216639 MTMR1Q13613 665 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 PGM5Q15124 567 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 ARHGEF16Q5VV41 709 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 DPY19L2Q6NUT2 758 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 B3GNT9Q6UX72 402 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 SLC30A10Q6XR72 485 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 REPS2Q8NFH8 660 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 RMDN3Q96TC7 470 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 TBC1D22BQ9NU19 505 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 KCND2Q9NZV8 630 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 COL4A3BPQ9Y5P4 624 aa19.29■□□□□ 0.68
VRK1-201ENST00000216639 EIF2AK2P19525 551 aaKnown RBP19.28■□□□□ 0.68
VRK1-201ENST00000216639 TBC1D8BQ0IIM8 1120 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 C9orf131Q5VYM1 1079 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 MIER3Q7Z3K6 550 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 RETREG2Q8NC44 543 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 MYRIPQ8NFW9 859 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 IL31RAQ8NI17 732 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 IQCDQ96DY2 449 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 CEP63Q96MT8 703 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 TEX13BQ9BXU2 312 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 AGO4Q9HCK5 861 aaKnown RBP19.28■□□□□ 0.68
VRK1-201ENST00000216639 PXMP2Q9NR77 195 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 UQCRHLA0A096LP55 91 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 GNA14O95837 355 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 UQCRHP07919 91 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 IREB2P48200 963 aaKnown RBP19.28■□□□□ 0.68
VRK1-201ENST00000216639 VGLL4Q14135 290 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 MAN2A1Q16706 1144 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 GLIS3Q8NEA6 775 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 EEF2KMTQ96G04 330 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 PDCD2LQ9BRP1 358 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 TCEAL9Q9UHQ7 104 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 SNCAIPQ9Y6H5 919 aa19.28■□□□□ 0.68
VRK1-201ENST00000216639 TRAF5O00463 557 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 MYCLP12524 364 aaPredicted RBP19.27■□□□□ 0.68
VRK1-201ENST00000216639 FXR1P51114 621 aaKnown RBP eCLIP19.27■□□□□ 0.68
VRK1-201ENST00000216639 MRPS9P82933 396 aaKnown RBP19.27■□□□□ 0.68
VRK1-201ENST00000216639 BAATQ14032 418 aaPredicted RBP19.27■□□□□ 0.68
VRK1-201ENST00000216639 TSR1Q2NL82 804 aaKnown RBP19.27■□□□□ 0.68
VRK1-201ENST00000216639 VWA3BQ502W6 1294 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 ZCWPW2Q504Y3 356 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 RINT1Q6NUQ1 792 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 LRRC55Q6ZSA7 311 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.27■□□□□ 0.68
VRK1-201ENST00000216639 TMTC1Q8IUR5 882 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 PIGOQ8TEQ8 1089 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 SCFD1Q8WVM8 642 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 ZNF592Q92610 1267 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 WNK4Q96J92 1243 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 ABHD10Q9NUJ1 306 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 ZNF214Q9UL59 606 aaPredicted RBP19.27■□□□□ 0.68
VRK1-201ENST00000216639 PPP2R2CQ9Y2T4 447 aa19.27■□□□□ 0.68
VRK1-201ENST00000216639 CCND2P30279 289 aa19.26■□□□□ 0.67
VRK1-201ENST00000216639 NF2P35240 595 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms