RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 USP17L22D6RA61 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L17D6RBQ6 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L19D6RCP7 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L20D6RJB6 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L24Q0WX57 530 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 NFIAQ12857 509 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 COASYQ13057 564 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 FAM83BQ5T0W9 1011 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 GALNT17Q6IS24 598 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 APOBEC3HQ6NTF7 200 aaKnown RBP17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L6PQ6QN14 398 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 CAMKK2Q96RR4 588 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 CAPS2Q9BXY5 557 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 TSGA10Q9BZW7 698 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 GRIN2DO15399 1336 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 POTEB3A0JP26 581 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 POTECB2RU33 542 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 MCM3P25205 808 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 FIGNQ5HY92 759 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 STYK1Q6J9G0 422 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 POTEBQ6S5H4 581 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 DDX42Q86XP3 938 aaKnown RBP eCLIP17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 MICALL1Q8N3F8 863 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 TEKT1Q969V4 418 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 ALS2CR12Q96Q35 445 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 KIAA1024Q9UPX6 916 aa17.45■□□□□ 0.38
SNAPC1-201ENST00000216294 MEIS1O00470 390 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 HEXIM1O94992 359 aaKnown RBP17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 HNRNPH3P31942 346 aaKnown RBP17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 ADCY7P51828 1080 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CACNB3P54284 484 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CORO7P57737 925 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 GABPAQ06546 454 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 KRT79Q5XKE5 535 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 DNAJC19Q96DA6 116 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 ECE2O60344 883 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CRKP46108 304 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CASP5P51878 434 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CDK17Q00537 523 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CCDC70Q6NSX1 233 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 PODNQ7Z5L7 613 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 GUF1Q8N442 669 aaKnown RBP17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 OR2W6PQ8NHA6 318 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 CENPHQ9H3R5 247 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 PANK4Q9NVE7 773 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 STK32BQ9NY57 414 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 NOP2P46087 812 aaKnown RBP17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 GUCY1A3Q02108 690 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 AOC3Q16853 763 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 MYOCDQ8IZQ8 938 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 QSER1Q2KHR3 1735 aa17.44■□□□□ 0.38
SNAPC1-201ENST00000216294 USP17L10C9JJH3 530 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 PAFAH1B1P43034 410 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 MAGEA9P43362 315 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 SLC20A2Q08357 652 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 KIAA0753Q2KHM9 967 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 ZFPM1Q8IX07 1006 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 ADGRF4Q8IZF3 695 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 DDX25Q9UHL0 483 aaKnown RBP17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 SLC9A1P19634 815 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 TMEM266Q2M3C6 531 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 SFMBT2Q5VUG0 894 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 CASKIN2Q8WXE0 1202 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 FAM107BQ9H098 131 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 TSPYL1Q9H0U9 437 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 JMJD4Q9H9V9 463 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 COL4A3BPQ9Y5P4 624 aa17.43■□□□□ 0.38
SNAPC1-201ENST00000216294 ZNF233A6NK53 670 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 LCA5LO95447 670 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 PSMC6P62333 389 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 HERC4Q5GLZ8 1057 aaPredicted RBP17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 IQCEQ6IPM2 695 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 HHIPL2Q6UWX4 724 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 AP1M1Q9BXS5 423 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 MAGEF1Q9HAY2 307 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 FOCADQ5VW36 1801 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 MPHOSPH10O00566 681 aaKnown RBP17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 BACH1O14867 736 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 NNTQ13423 1086 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 TTC31Q49AM3 519 aaPredicted RBP17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 DACT2Q5SW24 774 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 GJB7Q6PEY0 223 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 CCDC84Q86UT8 332 aaPredicted RBP17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 KAT2BQ92831 832 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 RUFY1Q96T51 708 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 RIOX1Q9H6W3 641 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
SNAPC1-201ENST00000216294 SMCHD1A6NHR9 2005 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 POTEFA5A3E0 1075 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 SHOX2O60902 331 aaPredicted RBP17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 POTEIP0CG38 1075 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 RBM5P52756 815 aaKnown RBP eCLIP17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 SEC24CP53992 1094 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 TCP10Q12799 353 aa17.41■□□□□ 0.38
SNAPC1-201ENST00000216294 FBXW10Q5XX13 1052 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms