RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 ZNF571Q7Z3V5 609 aaPredicted RBP6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 RETREG2Q8NC44 543 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 RBM46Q8TBY0 533 aaKnown RBP6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 C7orf25Q9BPX7 421 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 ZHX3Q9H4I2 956 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 MLXIPLQ9NP71 852 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 OSGEPQ9NPF4 335 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 BARHL2Q9NY43 387 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 PNMA2Q9UL42 364 aa6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 RTCBQ9Y3I0 505 aaKnown RBP6.4□□□□□ -1.38
CEACAM1-201ENST00000161559 E9PMD0 336 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 SART1O43290 800 aaKnown RBP6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 CALM1P0DP23 149 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 CALM2P0DP24 149 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 CALM3P0DP25 149 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 MYBL1P10243 752 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 CDK17Q00537 523 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 ZNF211Q13398 564 aaPredicted RBP6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 NAB2Q15742 525 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 CDC37Q16543 378 aaPredicted RBP6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 CCDC152Q4G0S7 254 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 ANKRD20A8PQ5CZ79 823 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 B4GALNT4Q76KP1 1039 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 TGFBRAP1Q8WUH2 860 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 GLG1Q92896 1179 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 SEC16BQ96JE7 1060 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 ERVK-5Q9HDB9 667 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 ATP8A1Q9Y2Q0 1164 aa6.4□□□□□ -1.39
CEACAM1-201ENST00000161559 GOLGA6L7A0A1B0GV03 622 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 BICDL2A1A5D9 508 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 PJA2O43164 708 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TRAPPC3O43617 180 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 CAND2O75155 1236 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 CAMTA2O94983 1202 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 PRLRP16471 622 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 POLD1P28340 1107 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 STAT3P40763 770 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 BAG6P46379 1132 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SLCO1A2P46721 670 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SCTRP47872 440 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 KCNA1Q09470 495 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 CPNE8Q86YQ8 564 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TEX2Q8IWB9 1127 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 METTL13Q8N6R0 699 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 LARP4BQ92615 738 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 PRCCQ92733 491 aaPredicted RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 THRAP3Q9Y2W1 955 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 NOC2LQ9Y3T9 749 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 IGSF9BQ9UPX0 1349 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 GMNCA6NCL1 334 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 USP17L5A8MUK1 530 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 GCOM1H8Y6P7 765 aaPredicted RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 BUB1BO60566 1050 aaPredicted RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 MYZAPP0CAP1 466 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TSPY3P0CV98 308 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TSPY8P0CW00 308 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 CALML3P27482 149 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 IFNAR2P48551 515 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 IFI35P80217 286 aaPredicted RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 FAM133BQ5BKY9 247 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 FIGNQ5HY92 759 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SFMBT2Q5VUG0 894 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 FAM196AQ6ZSG2 479 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 ANKS1AQ92625 1134 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 STAMBPL1Q96FJ0 436 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TAF1DQ9H5J8 278 aaPredicted RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 MKNK2Q9HBH9 465 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 ODF2LQ9ULJ1 636 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 PHLPP1O60346 1717 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 BCL9O00512 1426 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TLDC2A0PJX2 215 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TULP1O00294 542 aaPredicted RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 ORC4O43929 436 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 LRRN2O75325 713 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 APBA3O96018 575 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 ELF1P32519 619 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 HSPA9P38646 679 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SMTNP53814 917 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 ITIH3Q06033 890 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 KLHL30Q0D2K2 578 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 PPP2R5BQ15173 497 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 VPS72Q15906 364 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 CNNM4Q6P4Q7 775 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SV2BQ7L1I2 683 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 PARP9Q8IXQ6 854 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SNX29Q8TEQ0 813 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 SPIRE2Q8WWL2 714 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 TCP11Q8WWU5 503 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 THOC1Q96FV9 657 aaKnown RBP6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 AGAP1Q9UPQ3 857 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 ATP6V0A2Q9Y487 856 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 LAMB1P07942 1786 aa6.39□□□□□ -1.39
CEACAM1-201ENST00000161559 MEIS1O00470 390 aa6.38□□□□□ -1.39
CEACAM1-201ENST00000161559 ZBTB48P10074 688 aaPredicted RBP6.38□□□□□ -1.39
CEACAM1-201ENST00000161559 MYBP10242 640 aa6.38□□□□□ -1.39
CEACAM1-201ENST00000161559 CREB1P16220 341 aa6.38□□□□□ -1.39
CEACAM1-201ENST00000161559 BRD2P25440 801 aaKnown RBP6.38□□□□□ -1.39
CEACAM1-201ENST00000161559 TNFRSF8P28908 595 aa6.38□□□□□ -1.39
CEACAM1-201ENST00000161559 ADCY1Q08828 1119 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms