RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 MMTAG2Q9BU76 263 aaKnown RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 PANK4Q9NVE7 773 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 ARPP21Q9UBL0 812 aaPredicted RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
CTDP1-201ENST00000075430 STK38LQ9Y2H1 464 aa18.35■□□□□ 0.53
CTDP1-201ENST00000075430 GMNCA6NCL1 334 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 USP17L5A8MUK1 530 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 MPHOSPH10O00566 681 aaKnown RBP18.34■□□□□ 0.53
CTDP1-201ENST00000075430 PLTPP55058 493 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 GRB10Q13322 594 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 MAEAQ7L5Y9 396 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 CACNA2D3Q8IZS8 1091 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 PHRF1Q9P1Y6 1649 aaKnown RBP18.34■□□□□ 0.53
CTDP1-201ENST00000075430 UPP2O95045 317 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 SNAP25P60880 206 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 CYP4A11Q02928 519 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 TBC1D10BQ4KMP7 808 aaPredicted RBP18.34■□□□□ 0.53
CTDP1-201ENST00000075430 FAM26FQ5R3K3 315 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 PIK3R5Q8WYR1 880 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 BAP1Q92560 729 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
CTDP1-201ENST00000075430 BMP2KQ9NSY1 1161 aaPredicted RBP18.34■□□□□ 0.53
CTDP1-201ENST00000075430 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.34■□□□□ 0.53
CTDP1-201ENST00000075430 PTK2Q05397 1052 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 PPP2R5AQ15172 486 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 DYDC1Q8WWB3 177 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 GLG1Q92896 1179 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 GRID2IPA4D2P6 1211 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 MYBL1P10243 752 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.53
CTDP1-201ENST00000075430 BARHL2Q9NY43 387 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 COL4A3BPQ9Y5P4 624 aa18.33■□□□□ 0.53
CTDP1-201ENST00000075430 ATRNO75882 1429 aa18.33■□□□□ 0.52
CTDP1-201ENST00000075430 FOXO6A8MYZ6 492 aa18.33■□□□□ 0.52
CTDP1-201ENST00000075430 CPP00450 1065 aa18.33■□□□□ 0.52
CTDP1-201ENST00000075430 PRPF38AQ8NAV1 312 aaKnown RBP18.33■□□□□ 0.52
CTDP1-201ENST00000075430 ELAC2Q9BQ52 826 aaKnown RBP18.33■□□□□ 0.52
CTDP1-201ENST00000075430 BLOC1S4Q9NUP1 217 aa18.33■□□□□ 0.52
CTDP1-201ENST00000075430 SNX24Q9Y343 169 aa18.33■□□□□ 0.52
CTDP1-201ENST00000075430 L3MBTL1Q9Y468 752 aa18.33■□□□□ 0.52
CTDP1-201ENST00000075430 KDM4FA0A1W2PPD8 638 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 CLSTN1O94985 981 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 CNPY4Q8N129 248 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 EYA3Q99504 573 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 TAF1DQ9H5J8 278 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-201ENST00000075430 SNCBQ16143 134 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 ECM1Q16610 540 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 AADACL2Q6P093 401 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 KDM7AQ6ZMT4 941 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 RAPGEF5Q92565 580 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 SEC16BQ96JE7 1060 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 PTPN22Q9Y2R2 807 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 NR2E1Q9Y466 385 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 COL18A1P39060 1754 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 SPATA31A1Q5TZJ5 1347 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 CHUKO15111 745 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 GFPT2O94808 682 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 FGFR1OPO95684 399 aaKnown RBP18.32■□□□□ 0.52
CTDP1-201ENST00000075430 ZKSCAN8Q15776 578 aaPredicted RBP18.32■□□□□ 0.52
CTDP1-201ENST00000075430 ARHGAP44Q17R89 818 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 RPGRQ92834 1020 aaKnown RBP18.32■□□□□ 0.52
CTDP1-201ENST00000075430 OSBPL7Q9BZF2 842 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 ANAPC4Q9UJX5 808 aa18.32■□□□□ 0.52
CTDP1-201ENST00000075430 POTEB3A0JP26 581 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 SPDYE3A6NKU9 549 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 POTECB2RU33 542 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 FAM107AO95990 144 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 FGGP02679 453 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 TAL1P17542 331 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 PABPC4Q13310 644 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 NFIXQ14938 502 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 CENPPQ6IPU0 288 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 ALKBH5Q6P6C2 394 aaKnown RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 POTEBQ6S5H4 581 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 GPBP1Q86WP2 473 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 LEMD3Q9Y2U8 911 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 NOC2LQ9Y3T9 749 aaKnown RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 NR2F2P24468 414 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 GNA11P29992 359 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 FNTAP49354 379 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 CDC37Q16543 378 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 HGSNATQ68CP4 663 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 METTL13Q8N6R0 699 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 USP38Q8NB14 1042 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 YY1AP1Q9H869 796 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 FLT1P17948 1338 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 ZNF142P52746 1687 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 UFL1O94874 794 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 SERPING1P05155 500 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 KCNH2Q12809 1159 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 COASYQ13057 564 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 ITGB3BPQ13352 177 aaPredicted RBP18.31■□□□□ 0.52
CTDP1-201ENST00000075430 CYB5D1Q6P9G0 228 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 PNMA5Q96PV4 448 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 ATP6V0A2Q9Y487 856 aa18.31■□□□□ 0.52
CTDP1-201ENST00000075430 PAX7P23759 505 aa18.3■□□□□ 0.52
CTDP1-201ENST00000075430 SKOR1P84550 965 aa18.3■□□□□ 0.52
CTDP1-201ENST00000075430 ZNF844Q08AG5 666 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms