RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 LONRF2Q1L5Z9 754 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 PHLDB2Q86SQ0 1253 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 DCAF4Q8WV16 495 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 DDX12PQ92771 950 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 SELENOOQ9BVL4 669 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 ABT1Q9ULW3 272 aaKnown RBP13.24□□□□□ -0.29
CHPF2-201ENST00000035307 GAKO14976 1311 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 SALL1Q9NSC2 1324 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 NDUFA10O95299 355 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 XRCC5P13010 732 aaKnown RBP13.24□□□□□ -0.29
CHPF2-201ENST00000035307 TRAPPC10P48553 1259 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 VPS41P49754 854 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 FAM133AQ8N9E0 248 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 DDX41Q9UJV9 622 aaKnown RBP13.24□□□□□ -0.29
CHPF2-201ENST00000035307 RABGAP1Q9Y3P9 1069 aa13.24□□□□□ -0.29
CHPF2-201ENST00000035307 NFKBIEO00221 500 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 PLA2G4BP0C869 781 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 ATP2C1P98194 919 aaPredicted RBP13.23□□□□□ -0.29
CHPF2-201ENST00000035307 ODR4Q5SWX8 454 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 SELENOSQ9BQE4 189 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 DNAJC18Q9H819 358 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 ZNF541Q9H0D2 1346 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 JAG1P78504 1218 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 PPP4R3AQ6IN85 833 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 DYDC2Q96IM9 177 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 NUP58Q9BVL2 599 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 NYAP2Q9P242 653 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 ADAMTS1Q9UHI8 967 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 A0A087X0B3 334 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 SPOPO43791 374 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 TFRCP02786 760 aaKnown RBP13.23□□□□□ -0.29
CHPF2-201ENST00000035307 MTERF2Q49AM1 385 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 GALNT17Q6IS24 598 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 SRGAP1Q7Z6B7 1085 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 DAAM2Q86T65 1068 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 NUDT12Q9BQG2 462 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 CTTNBP2NLQ9P2B4 639 aa13.23□□□□□ -0.29
CHPF2-201ENST00000035307 IREB2P48200 963 aaKnown RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 FAM163AQ96GL9 167 aaPredicted RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 DPH5Q9H2P9 285 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 RWDD2AQ9UIY3 292 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 GLI3P10071 1580 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA8IPA6NC78 632 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA8JA6NMD2 632 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 FAM178BQ8IXR5 827 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 ZNF710Q8N1W2 664 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 MAP3K14Q99558 947 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 PLCD4Q9BRC7 762 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 TEKT3Q9BXF9 490 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 SEPT9Q9UHD8 586 aaPredicted RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 BAZ2AQ9UIF9 1905 aaKnown RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA6BA6NDN3 693 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 POTEJP0CG39 1038 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 CCNE1P24864 410 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 KLK7P49862 253 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 PEX26Q7Z412 305 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 DPP9Q86TI2 863 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 ZNF280CQ8ND82 737 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 SYT17Q9BSW7 474 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 HAUS4Q9H6D7 363 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 NHEJ1Q9H9Q4 299 aaPredicted RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 USTQ9Y2C2 406 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 ZBTB39O15060 712 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 VIL1P09327 827 aaKnown RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 CD44P16070 742 aaKnown RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
CHPF2-201ENST00000035307 TAB3Q8N5C8 712 aaPredicted RBP13.22□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA6L10A0A0M3HER8 536 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 TMEM150BA6NC51 233 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-201ENST00000035307 DLATP10515 647 aaKnown RBP13.21□□□□□ -0.29
CHPF2-201ENST00000035307 RDXP35241 583 aaKnown RBP13.21□□□□□ -0.29
CHPF2-201ENST00000035307 STK4Q13043 487 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 KCTD2Q14681 263 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 RRP1BQ14684 758 aaKnown RBP13.21□□□□□ -0.29
CHPF2-201ENST00000035307 IFI16Q16666 785 aaKnown RBP13.21□□□□□ -0.29
CHPF2-201ENST00000035307 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 FAM76AQ8TAV0 307 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 ZMYND12Q9H0C1 365 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 ABHD10Q9NUJ1 306 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 PLCH1Q4KWH8 1693 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA6CA6NDK9 693 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 LRRIQ4A6NIV6 560 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 K7ENM7 598 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 PGK2P07205 417 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA6DP0CG33 693 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 OSTNP61366 133 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 RPS6KA1Q15418 735 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 MICALL1Q8N3F8 863 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 MB21D1Q8N884 522 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 CCDC51Q96ER9 411 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 TAAR1Q96RJ0 339 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 NT5C3AQ9H0P0 336 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 GLT8D2Q9H1C3 349 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 NDST4Q9H3R1 872 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 GOLGA6AQ9NYA3 693 aa13.21□□□□□ -0.29
CHPF2-201ENST00000035307 PACSIN2Q9UNF0 486 aaPredicted RBP13.21□□□□□ -0.29
CHPF2-201ENST00000035307 TRPC6Q9Y210 931 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms